BS24731.complete Sequence
959 bp assembled on 2011-06-17
GenBank Submission: KX805276
> BS24731.complete
GAAGTTATCAGTCGACATGGCCATGGCCCAAACGGCACGCACCGCGACGG
CAAGGCGTCCCACGCACGACTACCACAGGCCGACGCGCTCCAAGTCCGCC
AATCCGGCGCAACTGCGTCCACTTAGCGGCATCCATGGAGCGGCGGTCTC
GTCGCGTCCGCGCTACGTTCCACCCTTCTCCATTCAGTCGCAGCAAAAGA
ACACGGTCGTCATCGACGGACCCATCCACGAAACCGCCCCCAAGACAGCC
AGTGCCAGGAGTCGGGTGCCCAATCCGAAAATTCTGAGGCGCCAACAAAA
GTCCATGTCCACCTTCAACTTGGGCATGGGTCTTAATGGCTGCTCCACCG
GTGGGGCTAATGATCCGGGACGAGGAACCCTCTTCCGAATGTACTTTGAC
CGCGGCGACCTGCCCATAAAGATGGAGTACCTCTGCGGGGGCGACAAAAT
CGGATGGACGGTGGACATTGAAAAGCTGGACTACAGCCTCTATCTGCCGC
TCTTCTTCGACGGACTGGCGGAGACGAAACATCCCTACAAGACCTATGCC
CGCCAGGGGGTCACGGATCTCCTCTTGGCCGGGGGCGAGAAGATACACCC
GGTGATACCGCAATTAATATTGCCGCTGAAGAACGCATTGAGCACACGAA
ACCTGGAGGTAATGTGCACGACATTGAAGATAATCCAACAGCTGGTCATG
TCCTCGGATTTGGTGGGACCCGCCCTGGTGCCCTTCTACCGCCAGTTGCT
GCCCATGTTCAATGCATTTAAGGTGAAAAACTTAAACTGCGGCGATGAGA
TCGACTATGCCCAGAAGAACAATCTGAATCTGGGGGATCTGATCGATGAG
ACGCTGCAGGTGCTGGAACTGCATGGCGGCGAGGATGCCTTCATCAACAT
CAAGTACATGGTGCCGACTTACGAGTCCTGCTATTTAAATTAAAAGCTTT
CTAGACCAT
BS24731.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:42:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15120-RA | 927 | CG15120-PA | 1..927 | 17..943 | 4620 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:42:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15120-RA | 1070 | CG15120-RA | 51..978 | 17..944 | 4625 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:42:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19497802..19498066 | 17..281 | 1325 | 100 | Plus |
| 2R | 25286936 | 2R | 19498160..19498341 | 282..463 | 910 | 100 | Plus |
| 2R | 25286936 | 2R | 19499618..19499790 | 460..632 | 865 | 100 | Plus |
| 2R | 25286936 | 2R | 19500119..19500280 | 783..944 | 795 | 99.4 | Plus |
| 2R | 25286936 | 2R | 19499901..19500050 | 633..782 | 750 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:42:48 has no hits.
BS24731.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:47:11 Download gff for
BS24731.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15120-RA | 49..973 | 17..941 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:41:01 Download gff for
BS24731.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15120-RA | 51..975 | 17..941 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:58:50 Download gff for
BS24731.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15120-RA | 51..975 | 17..941 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:58:50 Download gff for
BS24731.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19497802..19498066 | 17..281 | 100 | -> | Plus |
| 2R | 19498160..19498338 | 282..460 | 100 | -> | Plus |
| 2R | 19499619..19499790 | 461..632 | 100 | -> | Plus |
| 2R | 19499901..19500050 | 633..782 | 100 | -> | Plus |
| 2R | 19500119..19500277 | 783..941 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:41:01 Download gff for
BS24731.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15385307..15385571 | 17..281 | 100 | -> | Plus |
| arm_2R | 15385665..15385843 | 282..460 | 100 | -> | Plus |
| arm_2R | 15387124..15387295 | 461..632 | 100 | -> | Plus |
| arm_2R | 15387406..15387555 | 633..782 | 100 | -> | Plus |
| arm_2R | 15387624..15387782 | 783..941 | 99 | | Plus |
BS24731.pep Sequence
Translation from 16 to 942
> BS24731.pep
MAMAQTARTATARRPTHDYHRPTRSKSANPAQLRPLSGIHGAAVSSRPRY
VPPFSIQSQQKNTVVIDGPIHETAPKTASARSRVPNPKILRRQQKSMSTF
NLGMGLNGCSTGGANDPGRGTLFRMYFDRGDLPIKMEYLCGGDKIGWTVD
IEKLDYSLYLPLFFDGLAETKHPYKTYARQGVTDLLLAGGEKIHPVIPQL
ILPLKNALSTRNLEVMCTTLKIIQQLVMSSDLVGPALVPFYRQLLPMFNA
FKVKNLNCGDEIDYAQKNNLNLGDLIDETLQVLELHGGEDAFINIKYMVP
TYESCYLN*
BS24731.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:19:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15120-PA | 308 | CG15120-PA | 1..308 | 1..308 | 1617 | 100 | Plus |
| CG17349-PA | 266 | CG17349-PA | 32..252 | 49..304 | 415 | 38.9 | Plus |
