BS24732.complete Sequence
2042 bp assembled on 2011-07-18
GenBank Submission: KX803583
> BS24732.complete
GAAGTTATCAGTCGACATGATTGGCACTAGCAGCGGAACGTCCCACAATC
GGAGTCGAAAGAAGAAAGAACAGTGCGGATCCTGTCCCAACAGATTCTCA
AAGGATAAGCGCCAGGTGGCCGCCGAGGACTCGGATACCACGGAGGTGGA
ATCGTCTACGGATGAGGAGGAACGCTGGAAGGAAGTGGCGCGAGCCGCTG
AGATTCCGGCTGACTATTATAATATCCAAAAACTGGTGAAATACATCAAG
GCGGGCAATCAGACAGCCACTATAGTATCGTTGTGCTGCTTGAAGGACTA
CGATCTGAGCACCCAGATCAATCAGTTCGCCATCTCGGACATCGGCGGAC
TCGATGTCTTGGTTAACATCCTGGAGTGCAGCGACACCAAGTGCTGTTTG
GGCGCCCTCAAAGTTCTCTCAGATATCACACTGAACATCGATATTAGGAA
GACCATCGTAGATCTGGATGGCATTCCCCTCATTGTGGACATCCTAAACT
CTTCCATGAAGGACCTAAAAACCATGGCCGCCGAGACATTGGCCAATGTG
TGCAAGGTGCGACTGGCCAGAAAGTATGTGCGCACCTGCGGAGGAATCCC
CAAGCTGGTGGATCTCATCGACATCAAGTTGAGCATTCTAAAGACGCCTC
GTGACCAATTGAGTCCAGATGATCTGGAATCTCTCGATATGACACGCGCT
GGAGCCCGGGCTCTTTTCACTCTGGCCGATTCCAAGCACAACATGGAGCA
GATGCGCAAGAGCGGAATTGTTCCTTTGATGGCTCAGCTCCTTAAGTCCT
GTCACATCGATGTCGTCATTCCCATAATGGGCACCGTTCGAAAGTGCTCC
TCGGAGCCGAAGTTCCAACTGGCCATCACCACCGAGGGCATGATTCCCGA
CATTGTGAGCCATCTGAGTTCCGAAAATACCGAGCTGAAGATGGAGGGCA
GTACAGCGATCTACAAGTGCGCCTTCGACGGAACCACCAGGGATTTGGTG
AGGGAGGCTGGGGGCTTGGAACCTTTGGTAACTATCATAAAGGACAAGAA
TGTGAGGGAAAATAAGCCTTTATTGAGAGGCGCCACTGGAGCGATTTGGA
TGTGTGCCGTAACCGATGCAAATGTCAAAGTGCTGGATCAACTCAGGACG
GTGAACCACCTGGTGGCCTTGCTAAATGATGAGTGTGACGAGGTCCTGAC
CAACGTGACCGGAGCTATATCTGAATGTGTGAGATTTCAAAGCAATAGGG
AGCAACTGCGTCAGGCTGGAGGATTACCAGCAATGGTTTCCCTACTCAAC
AGTTCTCACGCCCCTCTTCTGGAAAATTTAGCCAAGGGATTGAAGGAGTG
TGCCGAAGATCCGGACAGCATGAGAATCCTTGAGGATCTGGATGCGGTCA
GGCTGATATGGTCGCTATTGAAGAACCCCACAACTAGGGTTCAGGCCCAT
GCGGCTTACGCCATATGTCCCTGTGTTCGAAATGCCAACGATTCCGCTGA
ATTGGTCAGGAGCTTGGTTGGCGCCATGGAACTGGTGGTGGGTCTGCTAA
AGTCCAAGGATATCATGGTCTTATCCGCCGTTTGTGCTGCCATTGCAACA
ATTGCCCAGGATCAAACCAATCTAGCCATCTTAACCGATCTGAAAGTCAT
CTACAAGCTAGCCGATCTCGTCCAGACCACCGACGACCTCCTTCGAATGA
ACTTGGCAGCTGCCGTGGCCGCCTGTGCCTGCTTCGGTAATAATACGGAG
GAACTGGGACGTCTGCGTACTGTCACTCCGATTGTCACCTACATGACCAG
CGACAATCCCTTGGTGCACCGCAGCACGGCCATGGCACTGGAGAAGCTAT
CGATGGATCCGCAGAACTGCATTACCATGCACCAGAGTGGAGTTGTTCCT
TTCCTGCTGGAGTGCATTGGATCCACTAACAAGGAGCTCCAGTTGGCCGC
CGCTGGTTGTCTGCGCAATATCCGCGAATTGGCCTTGCGTGCCGAGGAAT
ATCTGCTTAAAATCGACGATGACTAGAAGCTTTCTAGACCAT
BS24732.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:51:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gudu-RA | 2010 | CG5155-PA | 1..2010 | 17..2026 | 10050 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:51:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gudu-RA | 2252 | CG5155-RA | 169..2178 | 17..2026 | 10050 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:51:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7389373..7390626 | 632..1885 | 6270 | 100 | Plus |
| 2L | 23513712 | 2L | 7388676..7389292 | 17..633 | 3085 | 100 | Plus |
| 2L | 23513712 | 2L | 7390685..7390828 | 1883..2026 | 720 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 21:51:40 has no hits.
BS24732.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-18 16:37:12 Download gff for
BS24732.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5155-RA | 140..2149 | 17..2026 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:39:06 Download gff for
BS24732.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5155-RA | 169..2178 | 17..2026 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:44:21 Download gff for
BS24732.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gudu-RA | 169..2178 | 17..2026 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:44:21 Download gff for
BS24732.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7388676..7389292 | 17..633 | 100 | -> | Plus |
| 2L | 7389375..7390626 | 634..1885 | 100 | -> | Plus |
| 2L | 7390688..7390828 | 1886..2026 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:39:06 Download gff for
BS24732.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7388676..7389292 | 17..633 | 100 | -> | Plus |
| arm_2L | 7389375..7390626 | 634..1885 | 100 | -> | Plus |
| arm_2L | 7390688..7390828 | 1886..2026 | 100 | | Plus |
BS24732.pep Sequence
Translation from 16 to 2025
> BS24732.pep
MIGTSSGTSHNRSRKKKEQCGSCPNRFSKDKRQVAAEDSDTTEVESSTDE
EERWKEVARAAEIPADYYNIQKLVKYIKAGNQTATIVSLCCLKDYDLSTQ
INQFAISDIGGLDVLVNILECSDTKCCLGALKVLSDITLNIDIRKTIVDL
DGIPLIVDILNSSMKDLKTMAAETLANVCKVRLARKYVRTCGGIPKLVDL
IDIKLSILKTPRDQLSPDDLESLDMTRAGARALFTLADSKHNMEQMRKSG
IVPLMAQLLKSCHIDVVIPIMGTVRKCSSEPKFQLAITTEGMIPDIVSHL
SSENTELKMEGSTAIYKCAFDGTTRDLVREAGGLEPLVTIIKDKNVRENK
PLLRGATGAIWMCAVTDANVKVLDQLRTVNHLVALLNDECDEVLTNVTGA
ISECVRFQSNREQLRQAGGLPAMVSLLNSSHAPLLENLAKGLKECAEDPD
SMRILEDLDAVRLIWSLLKNPTTRVQAHAAYAICPCVRNANDSAELVRSL
VGAMELVVGLLKSKDIMVLSAVCAAIATIAQDQTNLAILTDLKVIYKLAD
LVQTTDDLLRMNLAAAVAACACFGNNTEELGRLRTVTPIVTYMTSDNPLV
HRSTAMALEKLSMDPQNCITMHQSGVVPFLLECIGSTNKELQLAAAGCLR
NIRELALRAEEYLLKIDDD*
BS24732.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:00:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gudu-PA | 669 | CG5155-PA | 1..669 | 1..669 | 3383 | 100 | Plus |
