BS24739.complete Sequence
932 bp assembled on 2011-06-17
GenBank Submission: KX804426
> BS24739.complete
GAAGTTATCAGTCGACATGCTCCAGAATTTCGCGTTTGAGAATCACCCCA
CAATCGGATTCTTTTCCAAGCAATCGGAGCTAATGAGAATGCTGCCCGAG
ATTCCCAAGCTGCGCAACATCTTCGATCTGTTCGTGGTCAATGAATGTGA
CCAGGCGGCTGGCGGAGAAGATGTGGCGGCCCCAACATGCTTGGATCTTG
GCATCGGGATACGGATGACGGATGTGGCGGACTGCCTGCGCATCATGGGC
CTGAATCCCAGTGACGACGAGCTGCAGCAGCGACTGGAGGAGCATGTGCG
TCGACGCGAGTCGTTGGGCATGGGAATGAAGAAGATCGCACAGCGCGCCA
CCTTTGAGCTGGTGCTCACGCTGTACTGCCAGCTGGCGGAGCAGGAGGTG
AAGGAGATGGCCAAGGGATGCATCGTCGAGAATGTGCTGCGCGTGTTGCG
TAGCCGCGATTCCGCGGGCACTGGCATGTTGCCCTACAGTCAGCTGCGCC
ATTTGCTGACCACCATGGGCAATCGATTGGACGAGACGGAGGTCTACGGC
GTGCTCCATCGCGCTGCGGACATTAATGGCAATGTCCTCTACGAGCACCT
AGTACACCAGCTGTTCGCCACGGATCCGCTGGCCGAGGAGCGGCTGCAAC
AGGCGCAGCTTTACCTGCAGGCCGTCGGACGCAATGCCATCGACATGGAC
ATGGATAAGCGGGACGAGTTCATCGATGCCATCCGGCGGGCGGATCCCGC
GCGCTCCGGTTTCATTGAGCCGCAGCGCCTGCTCGAGCTGCTCAATCGCA
ATGGGGAGCAGTTCACCGGCGAGGAGCTGCAGCTGCTCATCCAGGGAATG
GAGGATACACGGTGCAAGCGGGGCATCAACTATTGTCGCTTCCTGGAGTT
CATTATGAACGAGTAGAAGCTTTCTAGACCAT
BS24739.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:44:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34435-RA | 900 | CG34435-PA | 1..900 | 17..916 | 4500 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:44:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34435-RA | 1084 | CG34435-RA | 73..972 | 17..916 | 4500 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:44:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5613437..5614174 | 916..179 | 3690 | 100 | Minus |
| X | 23542271 | X | 5614233..5614395 | 179..17 | 815 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:44:43 has no hits.
BS24739.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:47:22 Download gff for
BS24739.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34435-RA | 1..900 | 17..916 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:41:40 Download gff for
BS24739.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34435-RA | 73..972 | 17..916 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:59:24 Download gff for
BS24739.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34435-RA | 73..972 | 17..916 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:59:24 Download gff for
BS24739.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5613437..5614173 | 180..916 | 100 | <- | Minus |
| X | 5614233..5614395 | 17..179 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:41:40 Download gff for
BS24739.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5507470..5508206 | 180..916 | 100 | <- | Minus |
| arm_X | 5508266..5508428 | 17..179 | 100 | | Minus |
BS24739.pep Sequence
Translation from 16 to 915
> BS24739.pep
MLQNFAFENHPTIGFFSKQSELMRMLPEIPKLRNIFDLFVVNECDQAAGG
EDVAAPTCLDLGIGIRMTDVADCLRIMGLNPSDDELQQRLEEHVRRRESL
GMGMKKIAQRATFELVLTLYCQLAEQEVKEMAKGCIVENVLRVLRSRDSA
GTGMLPYSQLRHLLTTMGNRLDETEVYGVLHRAADINGNVLYEHLVHQLF
ATDPLAEERLQQAQLYLQAVGRNAIDMDMDKRDEFIDAIRRADPARSGFI
EPQRLLELLNRNGEQFTGEELQLLIQGMEDTRCKRGINYCRFLEFIMNE*
BS24739.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:22:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34435-PA | 299 | CG34435-PA | 1..299 | 1..299 | 1538 | 100 | Plus |
| Mlc-c-PA | 147 | CG3201-PA | 27..146 | 65..201 | 159 | 27.7 | Plus |
| Mlc-c-PB | 153 | CG3201-PB | 33..152 | 65..201 | 159 | 27.7 | Plus |
