BS24740.complete Sequence
1352 bp assembled on 2011-06-17
GenBank Submission: KX806249
> BS24740.complete
GAAGTTATCAGTCGACATGATGCTTCAGTTTATCGGCCTAATTTTGGCGG
TCGTGATTCTGCGAGAGATTCGGGCACGTGAGGCGATCGCAACCATTCCA
GATGTGGGTCAGATAATCAAAGATCTCGATGGACTGCACATCGATGGAGA
AATGTTTCATCAAGGTTCTCCCTGCAGAGTGGATGTGCAAAATGATCTGC
CCCGTTTGGATAAAGTGCAGCCGCTGTACCTGCGCCCAGGAACAGATCTC
TACTGGCTGCCCAATGCTTATGGGCACCTGGAGGTTCAACGCGGCGCCAG
CATCGAGCTGCACTGCAGCCATTCGTTCGCGCCCGCGAATGGAGAGTCTT
TGGATGCGAAGCTGCGTTCCATTCGGGTGAAGTGCGTGCAGGACACCACC
TTCGAGTGGATGGGGGCTAAAATCCATTTCAGCGACTTTGTCTGCAATCA
CTCCATGCCCTACACCGTGGAGCGATTGGACAGGAGTTGTGGCAGCGACA
CTCCGAGTCCATCCACCTCGTACTTGTATCGCGTGGGCTATGACACCGGA
GATGGCAGATTTGTGGCCACCATGGAGCTGTGCCACGACCCAAATCAACT
GCGCACCCACTACGCCCACCATCAACTGACACCGGCGAATGTGCACTTCC
AGAAAAAATTGAAACGCCCGAGGTTTAGCACCGCCGGCCATTTCACGGGC
TTTGACATGGCCAGAATTTATTCGCCCAAGAGCCAGGAGAAACTGATGGT
GCCCGGCCTCATTGACGTGAAGAGTGGTCTGTTCCTGGCCCGCGGACATT
TGACGGCCAAAGCGGATCTAATCTATGCTAGCCAACAGAAGAGCAGCTTC
AACTACATGAACGTGGCGCCGCAATGGCAGAGCTTCAATGGTGGTCAGTG
GTCCAAGCTGGAGGAATCCACCCGACAATATGTGGCCCGTTCGGGCATCA
CGGCCACTGTGTATACGGGCATCTATGGCGAAATGAAGGTGGCTGGCAGC
AAAGTCCTCCACATGACCACCAATGCCAATAACATAGGTGTGGTGGCCGT
GCCCCAGCTCTTCTATCGCGTCCTCATCGACGAGGGCCATCCGACCCGCG
GAATCGCTTTGGTGGGTGTGAATAACCCACATGCCACCCTGGCCCAGATC
CACGAGTCCTATATCATCTGCGATCCAGTGGAGGAGTCGGTGCAGTGGCT
TAGCTGGCTGCACAAAAGCAACGCCAAGGGTAACCTGAAGAATGGCTATC
TGTATGCCTGTTCGGTGGCGAATTTGGCCCGGGCTGTCGGACATTTGCCA
CGCCCACTTCTCGAAGTGGATGAGCTGCTCACTTAGAAGCTTTCTAGACC
AT
BS24740.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:44:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14118-RA | 1320 | CG14118-PA | 1..1320 | 17..1336 | 6600 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:44:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14118-RA | 1637 | CG14118-RA | 56..1376 | 17..1337 | 6605 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:44:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12893323..12894497 | 163..1337 | 5875 | 100 | Plus |
| 3L | 28110227 | 3L | 12892713..12892862 | 17..166 | 750 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:44:53 has no hits.
BS24740.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:47:23 Download gff for
BS24740.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14118-RA | 56..1375 | 17..1336 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:41:44 Download gff for
BS24740.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14118-RA | 56..1375 | 17..1336 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:59:27 Download gff for
BS24740.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14118-RA | 56..1375 | 17..1336 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:59:27 Download gff for
BS24740.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12892713..12892860 | 17..164 | 100 | -> | Plus |
| 3L | 12893325..12894496 | 165..1336 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:41:44 Download gff for
BS24740.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12885813..12885960 | 17..164 | 100 | -> | Plus |
| arm_3L | 12886425..12887596 | 165..1336 | 100 | | Plus |
BS24740.pep Sequence
Translation from 16 to 1335
> BS24740.pep
MMLQFIGLILAVVILREIRAREAIATIPDVGQIIKDLDGLHIDGEMFHQG
SPCRVDVQNDLPRLDKVQPLYLRPGTDLYWLPNAYGHLEVQRGASIELHC
SHSFAPANGESLDAKLRSIRVKCVQDTTFEWMGAKIHFSDFVCNHSMPYT
VERLDRSCGSDTPSPSTSYLYRVGYDTGDGRFVATMELCHDPNQLRTHYA
HHQLTPANVHFQKKLKRPRFSTAGHFTGFDMARIYSPKSQEKLMVPGLID
VKSGLFLARGHLTAKADLIYASQQKSSFNYMNVAPQWQSFNGGQWSKLEE
STRQYVARSGITATVYTGIYGEMKVAGSKVLHMTTNANNIGVVAVPQLFY
RVLIDEGHPTRGIALVGVNNPHATLAQIHESYIICDPVEESVQWLSWLHK
SNAKGNLKNGYLYACSVANLARAVGHLPRPLLEVDELLT*
BS24740.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:22:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14118-PA | 439 | CG14118-PA | 1..439 | 1..439 | 2328 | 100 | Plus |
| CG14120-PA | 1371 | CG14120-PA | 953..1369 | 26..438 | 601 | 33 | Plus |
| CG6839-PA | 430 | CG6839-PA | 57..420 | 53..428 | 567 | 32.3 | Plus |
| CG3819-PB | 423 | CG3819-PB | 5..414 | 1..428 | 560 | 29.5 | Plus |
| CG3819-PA | 423 | CG3819-PA | 5..414 | 1..428 | 560 | 29.5 | Plus |
| CG14120-PA | 1371 | CG14120-PA | 601..975 | 51..438 | 518 | 31 | Plus |
| CG14120-PA | 1371 | CG14120-PA | 47..424 | 53..438 | 506 | 30.6 | Plus |
