BS24742.complete Sequence
590 bp assembled on 2011-06-17
GenBank Submission: KX802682
> BS24742.complete
GAAGTTATCAGTCGACATGCCGCAGGCCAATCTTACGTTAAGTCCCCATG
ATCAGCAGGTGCTCGATTCCATTTTCAATCCCCTCGAGCTTAGCAGCCTA
CAGACAAATAACTTAATTCCCGCTGAATCCGACCTGAAGGATGAGGAGCC
GGATACCCAGGCTATCAAAGCTTCCAGGGAACTGGAGCTAAAAGCCATCG
CCTTATCCGAAAGCGGGGAGCTTGATGGAGCACTGGAACTATTTCAACAA
TCATTAAATCTAGCCCAGAGGGCTTCCGTGCTTAATAATCGGGCACAAAC
TTTACGCCTAGCCAAACGTGATGAGGAGGCCCTCGATGACCTAAACAAAG
CCCTAGAACTGGCCAATGATCAGCAGACCCGCACCAAGTGCCATGCCCAT
TGTCAGCGAGGTGTCCTTTATCGTAAACTGGATAACTTGGAGGCGGCTCG
TGCCGATTTCGAGGCAGCAGCCCAGTTGGGCAGTAAATTCGCCAGAGAAC
AGTTGGTGGAAATCAATCCCTATGCAGCTCTCTGCAATCAAATGCTCCGT
CAGGCATTCGATCAACTCAAGTAGAAGCTTTCTAGACCAT
BS24742.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:45:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14105-RA | 558 | CG14105-PA | 1..558 | 17..574 | 2790 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:45:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14105-RA | 666 | CG14105-RA | 37..595 | 16..574 | 2795 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:45:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13426327..13426637 | 326..16 | 1555 | 100 | Minus |
| 3L | 28110227 | 3L | 13426089..13426265 | 502..326 | 885 | 100 | Minus |
| 3L | 28110227 | 3L | 13425962..13426036 | 574..500 | 375 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:45:09 has no hits.
BS24742.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:47:23 Download gff for
BS24742.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14105-RA | 38..595 | 17..574 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:41:49 Download gff for
BS24742.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14105-RA | 38..595 | 17..574 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:59:33 Download gff for
BS24742.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14105-RA | 38..595 | 17..574 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:59:33 Download gff for
BS24742.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13426089..13426264 | 327..502 | 100 | <- | Minus |
| 3L | 13425962..13426033 | 503..574 | 100 | <- | Minus |
| 3L | 13426327..13426636 | 17..326 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:41:49 Download gff for
BS24742.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13419062..13419133 | 503..574 | 100 | <- | Minus |
| arm_3L | 13419189..13419364 | 327..502 | 100 | <- | Minus |
| arm_3L | 13419427..13419736 | 17..326 | 100 | | Minus |
BS24742.pep Sequence
Translation from 16 to 573
> BS24742.pep
MPQANLTLSPHDQQVLDSIFNPLELSSLQTNNLIPAESDLKDEEPDTQAI
KASRELELKAIALSESGELDGALELFQQSLNLAQRASVLNNRAQTLRLAK
RDEEALDDLNKALELANDQQTRTKCHAHCQRGVLYRKLDNLEAARADFEA
AAQLGSKFAREQLVEINPYAALCNQMLRQAFDQLK*
BS24742.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:22:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14105-PA | 185 | CG14105-PA | 1..185 | 1..185 | 920 | 100 | Plus |
