BS24743.complete Sequence
638 bp assembled on 2011-06-17
GenBank Submission: KX803426
> BS24743.complete
GAAGTTATCAGTCGACATGATCTCACGACGCGACAAATTGCTGCAGCAGC
CGTGGGAGCAACTGCGGTACGCCCAGCACCGCGAGAAGGTCATGTCCGCC
CGCCCAGCCATTGACACCCACTCGCCGCGCGCCCACGAACACGTGCAGCG
CAAGTGGAAGAAGCAGCAAGTGGAGCGGGAGCGCCAGCAGCAGATCGAGC
GGGAGAACCTAAGACTCCTCCAGAAACTGGGCGACATCATGCGCACCAAG
CGCATCAACAATCTCTGGCTGGAGCCGCGGCCCAATTTTCTTAACCGCGA
GAAGCTTTTTGCCACCCGTCCGTACTCCAGCCTCCCGGAAGTGGTCACCA
TTTACGGAAAACAACCGCCGGGACCACTTATCTATGGCATGCTGCCCAAA
CCGGCGGTTGTGGGTCGGTGTCCCACCTGCAGCGGCAATCCGGAGCGCAC
CGAGGTGGCCATACCCGAGCAGCGAACTCCTTGGGCGCCCGAGAGAAAGT
CCTGGAACCGGAAGACCCAGGAGCAAGTAAAGCCGCATCGATGCTACCAC
TGCGGATCTGTAAAGACCAGCGAACGCAAGTACTTCGAGGAATTCTCCTA
CTCTTACTCCTACGACGAATGAAAGCTTTCTAGACCAT
BS24743.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:45:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14551-RB | 606 | CG14551-PB | 1..606 | 17..622 | 3030 | 100 | Plus |
| CG14551-RA | 606 | CG14551-PA | 1..606 | 17..622 | 3030 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:45:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14551-RB | 660 | CG14551-RB | 11..616 | 17..622 | 3030 | 100 | Plus |
| CG14551-RA | 1432 | CG14551-RA | 783..1388 | 17..622 | 3030 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:45:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26061312..26061648 | 622..286 | 1685 | 100 | Minus |
| 3R | 32079331 | 3R | 26061961..26062229 | 285..17 | 1345 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 14:45:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 672..712 | 202..162 | 115 | 75.6 | Minus |
BS24743.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:47:24 Download gff for
BS24743.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14551-RA | 783..1387 | 17..621 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:41:50 Download gff for
BS24743.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14551-RA | 783..1387 | 17..621 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:59:34 Download gff for
BS24743.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14551-RA | 783..1387 | 17..621 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:59:34 Download gff for
BS24743.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26061313..26061648 | 286..621 | 100 | <- | Minus |
| 3R | 26061961..26062229 | 17..285 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:41:50 Download gff for
BS24743.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21887035..21887370 | 286..621 | 100 | <- | Minus |
| arm_3R | 21887683..21887951 | 17..285 | 100 | | Minus |
BS24743.pep Sequence
Translation from 16 to 621
> BS24743.pep
MISRRDKLLQQPWEQLRYAQHREKVMSARPAIDTHSPRAHEHVQRKWKKQ
QVERERQQQIERENLRLLQKLGDIMRTKRINNLWLEPRPNFLNREKLFAT
RPYSSLPEVVTIYGKQPPGPLIYGMLPKPAVVGRCPTCSGNPERTEVAIP
EQRTPWAPERKSWNRKTQEQVKPHRCYHCGSVKTSERKYFEEFSYSYSYD
E*
BS24743.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:22:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14551-PB | 201 | CG14551-PB | 1..201 | 1..201 | 1093 | 100 | Plus |
| CG14551-PA | 201 | CG14551-PA | 1..201 | 1..201 | 1093 | 100 | Plus |
