BS24756.complete Sequence
398 bp assembled on 2011-06-17
GenBank Submission: KX800414
> BS24756.complete
GAAGTTATCAGTCGACATGGAGACGAAGTTCGTGGTCATAACTTTTCTAA
TAAGCTACGTACTTGCCCAATCGAATGCCGATTGTGGCAATAAGCCAATT
GTGGATGGAAATTGCGATCAGATAATCAAAGGATTTACTTTTGCAACCGA
AGAAAACCGATGCAAAAAGTTTAGAGCAAAGGGTTGCACAGTGGGCGGAA
ATTACTTTCGAGCCAAAGATGAGTGCGAGCTCAAATGCAAGGGTTATATA
AATTGGGGTATCGAAAGCTTCGGAAACGGAGATTGGGAAGAAAGTGAAAT
TGAGGACTATTGGAATAATGGTTCGGAAGAAAGCGAAGTCGAAAGCATCT
CGAATAGAGGATCGAAAAAACGAACTCTCTAAAAGCTTTCTAGACCAT
BS24756.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:46:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sfp24Ba-RA | 366 | CG42461-PA | 1..366 | 17..382 | 1830 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:46:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sfp24Ba-RA | 522 | CG42461-RA | 21..389 | 17..385 | 1845 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:46:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3668110..3668418 | 385..77 | 1545 | 100 | Minus |
| 2L | 23513712 | 2L | 3668471..3668531 | 77..17 | 305 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:46:09 has no hits.
BS24756.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:47:29 Download gff for
BS24756.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp24Ba-RA | 21..384 | 17..380 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:42:12 Download gff for
BS24756.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp24Ba-RA | 21..384 | 17..380 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:59:51 Download gff for
BS24756.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp24Ba-RA | 21..384 | 17..380 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:59:51 Download gff for
BS24756.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3668115..3668417 | 78..380 | 100 | <- | Minus |
| 2L | 3668471..3668531 | 17..77 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:42:12 Download gff for
BS24756.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3668115..3668417 | 78..380 | 100 | <- | Minus |
| arm_2L | 3668471..3668531 | 17..77 | 100 | | Minus |
BS24756.pep Sequence
Translation from 16 to 381
> BS24756.pep
METKFVVITFLISYVLAQSNADCGNKPIVDGNCDQIIKGFTFATEENRCK
KFRAKGCTVGGNYFRAKDECELKCKGYINWGIESFGNGDWEESEIEDYWN
NGSEESEVESISNRGSKKRTL*
BS24756.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:23:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sfp24Ba-PA | 121 | CG42461-PA | 1..121 | 1..121 | 659 | 100 | Plus |
| Sfp24Bc-PA | 100 | CG42602-PA | 4..76 | 5..74 | 178 | 45.2 | Plus |
| CG42463-PB | 111 | CG42463-PB | 8..77 | 6..75 | 174 | 45.7 | Plus |
