BS24759.complete Sequence
722 bp assembled on 2011-06-17
GenBank Submission: KX806510
> BS24759.complete
GAAGTTATCAGTCGACATGCTGCGCCTACTGATCGTTTTGGGATTTTATA
TCCTGGGCTGCCGAGCAGCCTGCAATACCTGCAACGCTAATGGCGTGTCC
TGTATATCGGAAACGGAGTTTCAGTTCTGCTCCTCCGCCAGCGAACCCAT
CGGAAACCTCTACACCTGCCCCACCGGTTACTACTGCACAGAGAGCACGC
CCATTTGCAGCTCCGTGGCATCTTCGGCAGGTTGTACAGGATGCAATACG
TGCAGTTCGGATAATCGTTTTGCTTGCACCGGTCGGAATACCTTTGCGCT
GTGCCTAGGTACTTCTACACCCAGTACATCGATTGGCGGAAGCTGTGGCA
CTAATTATGTATGCAACGTGGGGAACGCCAATATCTGTGGCAGTCCTGCC
ACATACGCAGTATCCTGTTCCACATCAAGTACGTCAGACTGCGATACTAC
GGCCATCAAAAATGCCACCGAGTATTGTCAAACCATTCAAACAGCCGGAA
AATATCCTTATGGCGGAGATACCTCAACCACCTGCAGGCAATATGTGAAC
TGTTACACCGCTGCTGGTATTTTCTATGGAAATGTGTACACTTGTCCAGG
ACTCACCTACTTCGATAGTACCTCCAAACTTTGCACCACCCAAACGCAGG
CCAGATGCTCGGATACAGTGTCTTGTTTGACTCTCAATAACCGATTATTG
CCGTAGAAGCTTTCTAGACCAT
BS24759.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:45:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13309-RA | 690 | CG13309-PA | 1..690 | 17..706 | 3450 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:45:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13309-RA | 800 | CG13309-RA | 17..707 | 17..707 | 3455 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:45:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8810411..8810934 | 17..540 | 2620 | 100 | Plus |
| 3L | 28110227 | 3L | 8811006..8811172 | 541..707 | 835 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:45:38 has no hits.
BS24759.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:47:26 Download gff for
BS24759.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13309-RA | 17..706 | 17..706 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:42:00 Download gff for
BS24759.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13309-RA | 17..706 | 17..706 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:59:42 Download gff for
BS24759.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13309-RA | 17..706 | 17..706 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:59:42 Download gff for
BS24759.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8810411..8810934 | 17..540 | 100 | -> | Plus |
| 3L | 8811006..8811171 | 541..706 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:42:00 Download gff for
BS24759.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8803511..8804034 | 17..540 | 100 | -> | Plus |
| arm_3L | 8804106..8804271 | 541..706 | 100 | | Plus |
BS24759.pep Sequence
Translation from 16 to 705
> BS24759.pep
MLRLLIVLGFYILGCRAACNTCNANGVSCISETEFQFCSSASEPIGNLYT
CPTGYYCTESTPICSSVASSAGCTGCNTCSSDNRFACTGRNTFALCLGTS
TPSTSIGGSCGTNYVCNVGNANICGSPATYAVSCSTSSTSDCDTTAIKNA
TEYCQTIQTAGKYPYGGDTSTTCRQYVNCYTAAGIFYGNVYTCPGLTYFD
STSKLCTTQTQARCSDTVSCLTLNNRLLP*
BS24759.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:23:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13309-PA | 229 | CG13309-PA | 1..229 | 1..229 | 1261 | 100 | Plus |
| CG13308-PB | 233 | CG13308-PB | 1..230 | 1..223 | 569 | 49.1 | Plus |
| CG13312-PA | 342 | CG13312-PA | 15..249 | 4..219 | 427 | 38 | Plus |
| CG13312-PA | 342 | CG13312-PA | 94..341 | 19..228 | 285 | 30.3 | Plus |
| CG32024-PA | 209 | CG32024-PA | 5..209 | 1..215 | 277 | 29.8 | Plus |
| CG14958-PA | 145 | CG14958-PA | 4..136 | 1..129 | 245 | 36.6 | Plus |
