BS24769.complete Sequence
752 bp assembled on 2011-06-17
GenBank Submission: KX800895
> BS24769.complete
GAAGTTATCAGTCGACATGTTCATCCAAAGCTTCCTGTTGCTATTGGCGC
TCAATTCCCTGTCCGCAGGACCAGTAATCCGGCCGGAAGAACGCATTATC
GGTGGACAACCCATTGGAATCGAGGAGGCACCATGGCAGGTGTCCATACA
ACGTGATGGCAAACATTTATGCGGTGGCTCCATTTACAGCGCAGATATCA
TCATTACTGCGGCCCATTGCGTCCAGGGCCAGGGATATCAAGTTCGGGCA
GGATCCGCCTTGAAGAACTCCAATGGAAGTGTTGTCGATGTGGCCGCTAT
AAGGACGCATGAGGGATTAGGAAACGACATCGCCATCGTGCGGCTAAGTA
AGCCACTTGAGTTCACAAACCAAGTTCAGCCCATTCCATTGGCCAAGACA
AATCCCCCGCCTGGATCGATTGCCTTCGTCTCTGGCTGGGGAAGTTCTTC
TTATTACTCACATCCCATCGATCTTCAAGGAGTAAACCTTTACATTCAAT
GGCCGTACTATTGTGGATTAACTGAACCGTCAAGAATATGCGCCGGATCT
TTTGGAAGGGCGGCTTGTAAAGGAGACTCTGGTGGACCGTTGGTGTTTGA
CCAACAACTTGTGGGTGTTGTATCCGGGGGTACAAAGGATTGCACGTATA
GTTCAATCTACACTAGTGTCCCATATTTCCGTGAATGGATCTTAAATGCT
ATCGATGAAATAATGTCAGCGAATAGAAACAAATAAAAGCTTTCTAGACC
AT
BS24769.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:47:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Send2-RA | 720 | CG18125-PA | 1..720 | 17..736 | 3585 | 99.9 | Plus |
| CG17234-RA | 756 | CG17234-PA | 1..203 | 17..219 | 445 | 81.3 | Plus |
| CG17234-RA | 756 | CG17234-PA | 345..465 | 322..442 | 365 | 86.8 | Plus |
| CG17234-RA | 756 | CG17234-PA | 575..740 | 537..702 | 305 | 78.9 | Plus |
| CG17234-RA | 756 | CG17234-PA | 237..310 | 229..302 | 205 | 85.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:47:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Send2-RA | 774 | CG18125-RA | 35..755 | 17..737 | 3590 | 99.9 | Plus |
| CG17234-RA | 808 | CG17234-RA | 29..237 | 11..219 | 460 | 81.3 | Plus |
| CG17234-RA | 808 | CG17234-RA | 379..499 | 322..442 | 365 | 86.8 | Plus |
| CG17234-RA | 808 | CG17234-RA | 609..774 | 537..702 | 305 | 78.9 | Plus |
| CG17234-RA | 808 | CG17234-RA | 271..344 | 229..302 | 205 | 85.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:47:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 14345934..14346654 | 737..17 | 3590 | 99.9 | Minus |
| 2L | 23513712 | 2L | 2253073..2253281 | 11..219 | 460 | 81.3 | Plus |
| 2L | 23513712 | 2L | 2253423..2253543 | 322..442 | 365 | 86.8 | Plus |
| 2L | 23513712 | 2L | 2253653..2253818 | 537..702 | 305 | 78.9 | Plus |
| 2L | 23513712 | 2L | 2253315..2253388 | 229..302 | 205 | 85.1 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:47:20 has no hits.
BS24769.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:47:33 Download gff for
BS24769.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18125-RA | 6..710 | 22..726 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:42:41 Download gff for
BS24769.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Send2-RA | 40..744 | 22..726 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:00:15 Download gff for
BS24769.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Send2-RA | 40..744 | 22..726 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:00:15 Download gff for
BS24769.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 14345945..14346649 | 22..726 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:42:41 Download gff for
BS24769.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 14345945..14346649 | 22..726 | 99 | | Minus |
BS24769.pep Sequence
Translation from 16 to 735
> BS24769.pep
MFIQSFLLLLALNSLSAGPVIRPEERIIGGQPIGIEEAPWQVSIQRDGKH
LCGGSIYSADIIITAAHCVQGQGYQVRAGSALKNSNGSVVDVAAIRTHEG
LGNDIAIVRLSKPLEFTNQVQPIPLAKTNPPPGSIAFVSGWGSSSYYSHP
IDLQGVNLYIQWPYYCGLTEPSRICAGSFGRAACKGDSGGPLVFDQQLVG
VVSGGTKDCTYSSIYTSVPYFREWILNAIDEIMSANRNK*
BS24769.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:25:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Send2-PA | 239 | CG18125-PA | 1..239 | 1..239 | 1258 | 100 | Plus |
| CG17234-PA | 251 | CG17234-PA | 1..250 | 1..232 | 747 | 62.8 | Plus |
| Send1-PA | 255 | CG17012-PA | 1..244 | 1..230 | 523 | 47.1 | Plus |
| alphaTry-PA | 256 | CG18444-PA | 30..256 | 26..232 | 431 | 44.7 | Plus |
| CG30025-PA | 253 | CG30025-PA | 4..251 | 6..227 | 425 | 40.2 | Plus |
