Clone BS24781 Report

Search the DGRC for BS24781

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:247
Well:81
Vector:pDNR-Dual
Associated Gene/TranscriptCG17169-RB
Protein status:BS24781.pep: gold
Sequenced Size:377

Clone Sequence Records

BS24781.complete Sequence

377 bp assembled on 2011-06-17

GenBank Submission: KX801020

> BS24781.complete
GAAGTTATCAGTCGACATGCGATGGCAGTTGGCAATTATGTGGCTTTTCG
CCTCCGCGTTTGCAGTACCTTTCATAAAGTGGCGCCGCCAAATAGTTACG
CCGAAGCACTTGATGGCACCACCTTTGTCACCCATCGCACAGGACAAGGT
TGTGGTCACCCCGCAGAAGCTTAGAGAAGTGGCTGACTTTAAGGCCATGA
TCCAAAAGGCCGTCGATGAGAACACTTACGTGGTGGCCGCTGCACCATCA
AAGGATTTTCTAGCGACACTGGGTGGAAATTGGGGAGCACCTATATCCTT
GCCTCACTCCTGGACCGCGCCAGCCTTTAATCTTACCTTTTTTTGGCATG
GATTTGGCTAAAAGCTTTCTAGACCAT

BS24781.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:47:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG17169-RB 345 CG17169-PB 1..345 17..361 1710 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:47:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG17169-RB 532 CG17169-RB 18..362 17..361 1710 99.7 Plus
CG17159-RF 4662 CG17159-RF 4256..4365 361..252 550 100 Minus
CG17162-RH 4590 CG17162-RH 4184..4293 361..252 550 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:47:45
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 23084689..23084926 17..254 1175 99.6 Plus
X 23542271 X 23085257..23085366 252..361 550 100 Plus
Blast to na_te.dros performed on 2014-11-26 14:47:46 has no hits.

BS24781.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:47:35 Download gff for BS24781.complete
Subject Subject Range Query Range Percent Splice Strand
CG17169-RB 18..360 17..359 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:42:50 Download gff for BS24781.complete
Subject Subject Range Query Range Percent Splice Strand
CG17169-RB 18..360 17..359 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:00:22 Download gff for BS24781.complete
Subject Subject Range Query Range Percent Splice Strand
CG17169-RB 18..360 17..359 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:00:22 Download gff for BS24781.complete
Subject Subject Range Query Range Percent Splice Strand
X 23084689..23084925 17..253 99 -> Plus
X 23085259..23085364 254..359 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:42:50 Download gff for BS24781.complete
Subject Subject Range Query Range Percent Splice Strand
XHet 63507..63743 17..253 99 -> Plus
XHet 64077..64182 254..359 100   Plus

BS24781.pep Sequence

Translation from 16 to 360

> BS24781.pep
MRWQLAIMWLFASAFAVPFIKWRRQIVTPKHLMAPPLSPIAQDKVVVTPQ
KLREVADFKAMIQKAVDENTYVVAAAPSKDFLATLGGNWGAPISLPHSWT
APAFNLTFFWHGFG*

BS24781.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:25:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG17169-PB 114 CG17169-PB 1..114 1..114 613 100 Plus