BS24785.complete Sequence
428 bp assembled on 2011-06-17
GenBank Submission: KX806178
> BS24785.complete
GAAGTTATCAGTCGACATGAATGAATCCACACCAAGTAACTGCAGCACAC
GAAACACACAAATACCAATTCGAGCGGTTCTCAGACAGACCAGGGAAAGT
TTAACTGAGATCTTTACCAAGTATCGCCAAAAAGTGGGCAATGGAGCTCT
CCTGGCGGTTCAAAGGGTCAAAACTTCTCAACAATTAAGTCTTATAAAGC
CAAGCCTTCGTTGTGTAACCAAACGACAGAGTTTCTTTAAACGATATGGA
TGCGAAGAGGTGGCCACTGTGTGCCTTTTGGTGGTCATTTTGTTGATGCT
CTTGTTTGGACTTTACCTGGCCAGGAACTACAATCACGCCTATATCTATG
GCTCTGGTGGATGCCTTTCGACGTTTTTGTGGACATACGATGAATGCCAA
ATAATTACATAGAAGCTTTCTAGACCAT
BS24785.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:48:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34245-RD | 396 | CG34245-PD | 1..396 | 17..412 | 1980 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:48:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34245-RD | 560 | CG34245-RD | 91..486 | 17..412 | 1980 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:48:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 14894112..14894326 | 231..17 | 1075 | 100 | Minus |
3L | 28110227 | 3L | 14893808..14893990 | 412..230 | 915 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:48:07 has no hits.
BS24785.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:47:36 Download gff for
BS24785.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34245-RD | 91..486 | 17..412 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:42:57 Download gff for
BS24785.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34245-RD | 91..486 | 17..412 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:00:29 Download gff for
BS24785.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34245-RD | 91..486 | 17..412 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:00:29 Download gff for
BS24785.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 14893808..14893988 | 232..412 | 100 | <- | Minus |
3L | 14894112..14894326 | 17..231 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:42:57 Download gff for
BS24785.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 14886908..14887088 | 232..412 | 100 | <- | Minus |
arm_3L | 14887212..14887426 | 17..231 | 100 | | Minus |
BS24785.pep Sequence
Translation from 16 to 411
> BS24785.pep
MNESTPSNCSTRNTQIPIRAVLRQTRESLTEIFTKYRQKVGNGALLAVQR
VKTSQQLSLIKPSLRCVTKRQSFFKRYGCEEVATVCLLVVILLMLLFGLY
LARNYNHAYIYGSGGCLSTFLWTYDECQIIT*
BS24785.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:25:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34245-PD | 131 | CG34245-PD | 1..131 | 1..131 | 677 | 100 | Plus |