BS24788.complete Sequence
539 bp assembled on 2011-06-17
GenBank Submission: KX802423
> BS24788.complete
GAAGTTATCAGTCGACATGGCCAAATGCGAATGTCTTCTCGCTGCGGGCC
TGGTTCCATTGATGCTGACCAGCTCCATCGTGGCCACTTGGACTTGGAGA
TGTTTGTACAAAGAATTTCCAGTGGACGTTGAAAAGATCAAGGGCGGCTG
GTATGTTTATGGGACTAGTCCCGGGAGAATTAAGGTCTGCTACTTTGAAG
AGCTGGATCTGTATTGGACCAGGATCACCCAAACGGACTTTACAAATTAT
GCCGTTGAGCTGCATTGTTCCTTACCCTGGATGCGTCATCAGATGGCTAT
TTATACGCGAAAAGCCATCCCGAGTGAAAAGACTCTCGAAGATATAGCTG
CGTATCTGAAGACAGTGGATCTGACAATCAAAAACTTCAGCCTAATCCGG
CAAAATAAGGACTGTCGGTCGCAGAAGCCTCCGATCATGCAGCGCTGGCA
TTTGTCCCGATATCTGTACATGGATTATAATCCGGTTTATGTCAAGCCCT
TGGTGGAGAACGAAAACATCTGAAAGCTTTCTAGACCAT
BS24788.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:48:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34256-RB | 507 | CG34256-PB | 1..507 | 17..523 | 2535 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:48:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34256-RB | 762 | CG34256-RB | 93..600 | 16..523 | 2540 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:48:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18988898..18989217 | 523..204 | 1600 | 100 | Minus |
| 3L | 28110227 | 3L | 18989603..18989723 | 136..16 | 605 | 100 | Minus |
| 3L | 28110227 | 3L | 18989467..18989535 | 203..135 | 345 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:48:27 has no hits.
BS24788.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:47:38 Download gff for
BS24788.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34256-RB | 94..599 | 17..522 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:43:04 Download gff for
BS24788.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34256-RB | 94..599 | 17..522 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:00:35 Download gff for
BS24788.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34256-RB | 94..599 | 17..522 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:00:35 Download gff for
BS24788.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18988899..18989217 | 204..522 | 100 | <- | Minus |
| 3L | 18989467..18989533 | 137..203 | 100 | <- | Minus |
| 3L | 18989603..18989722 | 17..136 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:43:04 Download gff for
BS24788.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18981999..18982317 | 204..522 | 100 | <- | Minus |
| arm_3L | 18982567..18982633 | 137..203 | 100 | <- | Minus |
| arm_3L | 18982703..18982822 | 17..136 | 100 | | Minus |
BS24788.pep Sequence
Translation from 16 to 522
> BS24788.pep
MAKCECLLAAGLVPLMLTSSIVATWTWRCLYKEFPVDVEKIKGGWYVYGT
SPGRIKVCYFEELDLYWTRITQTDFTNYAVELHCSLPWMRHQMAIYTRKA
IPSEKTLEDIAAYLKTVDLTIKNFSLIRQNKDCRSQKPPIMQRWHLSRYL
YMDYNPVYVKPLVENENI*
BS24788.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:26:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34256-PB | 168 | CG34256-PB | 1..168 | 1..168 | 917 | 100 | Plus |
