BS24801.complete Sequence
326 bp assembled on 2011-06-17
GenBank Submission: KX803662
> BS24801.complete
GAAGTTATCAGTCGACATGAAGGTTCAGCTCGCTCTAACCTCCCTACTAG
TGATTTCTTTTGGCATTGCCCTCGCCTATGATGGTGACGGACAGCCGGGT
TGCAAGACCCAAGCCGAGCTAGACATTGTAGTTTTCCGCAACAATTGGGA
TGCCACATCGTATTGGAAGTGTGAGACACTTAACAAACCAGCCATTGAAA
TCAAGTGCCCCAGCGAAACAGGATTCATGGATAGTCTCAAGAACTGCGTC
AACTGGGAGGAATGGGAATGGGAGAAACCAGTGGAGCCCCTTAGCGAAGC
GGATCAGTGAAAGCTTTCTAGACCAT
BS24801.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:48:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14645-RA | 294 | CG14645-PA | 1..294 | 17..310 | 1470 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:48:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14645-RA | 409 | CG14645-RA | 20..313 | 17..310 | 1470 | 100 | Plus |
| Skp2-RA | 2412 | CG9772-RA | 1881..2174 | 310..17 | 1470 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:48:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4335117..4335410 | 17..310 | 1470 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:48:46 has no hits.
BS24801.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:47:39 Download gff for
BS24801.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14645-RA | 1..293 | 17..309 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:43:12 Download gff for
BS24801.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Skp2-RA | 1894..2186 | 17..309 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:00:40 Download gff for
BS24801.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Skp2-RA | 1882..2174 | 17..309 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:00:40 Download gff for
BS24801.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4335117..4335409 | 17..309 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:43:12 Download gff for
BS24801.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 160839..161131 | 17..309 | 100 | | Plus |
BS24801.pep Sequence
Translation from 16 to 309
> BS24801.pep
MKVQLALTSLLVISFGIALAYDGDGQPGCKTQAELDIVVFRNNWDATSYW
KCETLNKPAIEIKCPSETGFMDSLKNCVNWEEWEWEKPVEPLSEADQ*
BS24801.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:26:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14645-PA | 97 | CG14645-PA | 1..97 | 1..97 | 531 | 100 | Plus |
| CG14245-PB | 103 | CG14245-PB | 29..100 | 25..96 | 172 | 38.9 | Plus |
| CG14245-PA | 103 | CG14245-PA | 29..100 | 25..96 | 172 | 38.9 | Plus |
| Peritrophin-15a-PA | 92 | CG17814-PA | 16..88 | 12..85 | 161 | 39.2 | Plus |
| CG14300-PA | 94 | CG14300-PA | 1..90 | 1..91 | 161 | 34.1 | Plus |
