BS24809.complete Sequence
326 bp assembled on 2011-06-23
GenBank Submission: KX802724
> BS24809.complete
GAAGTTATCAGTCGACATGGTTTGGATTTCGAGCTGGGGGCAACTTTGGC
TGGTGTTGCTATTGGTTGTGGGCCTATCGTTGGGTCTTCCGAGCTTGGAA
AACCAGACACACGAACAAATCGAACAGATAATAGCCTGCAGACAGCCAAA
GGCACCTGGTTTGTGCCGGGGTCACCAGTTGCGATATGCCTACAACAAGA
AGACCGGAAACTGCGAGAGCTTCATCTACACGGGCTGTGCCTCCACTGAG
AACAATTTCCTGACCTTCGAGGAGTGTCGCAGGGATTGCATGCAACGTCT
GCGCTACTGAAAGCTTTCTAGACCAT
BS24809.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:46:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15418-RA | 294 | CG15418-PA | 1..294 | 17..310 | 1470 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:46:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15418-RA | 508 | CG15418-RA | 176..470 | 17..311 | 1475 | 100 | Plus |
Dot-RB | 2303 | CG2788-RB | 1878..2056 | 311..133 | 895 | 100 | Minus |
Dot-RB | 2303 | CG2788-RB | 2119..2236 | 134..17 | 590 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:46:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 3621148..3621326 | 311..133 | 895 | 100 | Minus |
2L | 23513712 | 2L | 3621389..3621506 | 134..17 | 590 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:46:12 has no hits.
BS24809.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-23 12:08:09 Download gff for
BS24809.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15418-RA | 176..468 | 17..309 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:57:31 Download gff for
BS24809.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15418-RA | 176..468 | 17..309 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:19:53 Download gff for
BS24809.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15418-RA | 176..468 | 17..309 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:19:53 Download gff for
BS24809.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3621150..3621324 | 135..309 | 100 | <- | Minus |
2L | 3621389..3621506 | 17..134 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:57:31 Download gff for
BS24809.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 3621150..3621324 | 135..309 | 100 | <- | Minus |
arm_2L | 3621389..3621506 | 17..134 | 100 | | Minus |
BS24809.pep Sequence
Translation from 16 to 309
> BS24809.pep
MVWISSWGQLWLVLLLVVGLSLGLPSLENQTHEQIEQIIACRQPKAPGLC
RGHQLRYAYNKKTGNCESFIYTGCASTENNFLTFEECRRDCMQRLRY*
BS24809.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:35:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15418-PA | 97 | CG15418-PA | 1..97 | 1..97 | 531 | 100 | Plus |
CG3604-PB | 132 | CG3604-PB | 55..106 | 41..92 | 144 | 48.1 | Plus |
CG3604-PA | 132 | CG3604-PA | 55..106 | 41..92 | 144 | 48.1 | Plus |
CG2816-PB | 84 | CG2816-PB | 9..81 | 16..91 | 134 | 38.2 | Plus |