Clone BS24809 Report

Search the DGRC for BS24809

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:248
Well:9
Vector:pDNR-Dual
Associated Gene/TranscriptCG15418-RA
Protein status:BS24809.pep: full length peptide match
Sequenced Size:326

Clone Sequence Records

BS24809.complete Sequence

326 bp assembled on 2011-06-23

GenBank Submission: KX802724

> BS24809.complete
GAAGTTATCAGTCGACATGGTTTGGATTTCGAGCTGGGGGCAACTTTGGC
TGGTGTTGCTATTGGTTGTGGGCCTATCGTTGGGTCTTCCGAGCTTGGAA
AACCAGACACACGAACAAATCGAACAGATAATAGCCTGCAGACAGCCAAA
GGCACCTGGTTTGTGCCGGGGTCACCAGTTGCGATATGCCTACAACAAGA
AGACCGGAAACTGCGAGAGCTTCATCTACACGGGCTGTGCCTCCACTGAG
AACAATTTCCTGACCTTCGAGGAGTGTCGCAGGGATTGCATGCAACGTCT
GCGCTACTGAAAGCTTTCTAGACCAT

BS24809.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:46:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG15418-RA 294 CG15418-PA 1..294 17..310 1470 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:46:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG15418-RA 508 CG15418-RA 176..470 17..311 1475 100 Plus
Dot-RB 2303 CG2788-RB 1878..2056 311..133 895 100 Minus
Dot-RB 2303 CG2788-RB 2119..2236 134..17 590 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:46:11
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3621148..3621326 311..133 895 100 Minus
2L 23513712 2L 3621389..3621506 134..17 590 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:46:12 has no hits.

BS24809.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-23 12:08:09 Download gff for BS24809.complete
Subject Subject Range Query Range Percent Splice Strand
CG15418-RA 176..468 17..309 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:57:31 Download gff for BS24809.complete
Subject Subject Range Query Range Percent Splice Strand
CG15418-RA 176..468 17..309 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:19:53 Download gff for BS24809.complete
Subject Subject Range Query Range Percent Splice Strand
CG15418-RA 176..468 17..309 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:19:53 Download gff for BS24809.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3621150..3621324 135..309 100 <- Minus
2L 3621389..3621506 17..134 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:57:31 Download gff for BS24809.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3621150..3621324 135..309 100 <- Minus
arm_2L 3621389..3621506 17..134 100   Minus

BS24809.pep Sequence

Translation from 16 to 309

> BS24809.pep
MVWISSWGQLWLVLLLVVGLSLGLPSLENQTHEQIEQIIACRQPKAPGLC
RGHQLRYAYNKKTGNCESFIYTGCASTENNFLTFEECRRDCMQRLRY*

BS24809.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:35:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG15418-PA 97 CG15418-PA 1..97 1..97 531 100 Plus
CG3604-PB 132 CG3604-PB 55..106 41..92 144 48.1 Plus
CG3604-PA 132 CG3604-PA 55..106 41..92 144 48.1 Plus
CG2816-PB 84 CG2816-PB 9..81 16..91 134 38.2 Plus