Clone BS24822 Report

Search the DGRC for BS24822

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:248
Well:22
Vector:pDNR-Dual
Associated Gene/TranscriptCG13114-RB
Protein status:BS24822.pep: full length peptide match
Sequenced Size:1313

Clone Sequence Records

BS24822.complete Sequence

1313 bp assembled on 2011-06-23

GenBank Submission: KX801323

> BS24822.complete
GAAGTTATCAGTCGACATGTTCGAACGCTGCAATTTATTATTTATGACCA
TGCTGATGGCATCGGCACTATTGACCCAAGCCCATTTCCCGGAATATTGT
GCGGAATGTGAACAGGAGGTGTGGGAACAGGTGCCGTGCAGCGAGGTGCC
CACAACGGTAGCGCCAACAACAACCGGAGGCTCTACGTTGAGCCCGCCCA
CAACCAGCGCCACCAGCCCGGGACCTATTTACCCAACAACAACCAGTGCC
CCACCCACGCCCACGGATTACACTACACAGCCATCGGAGTACAAGAAGTG
CTACTGCGAATGCAAGCTGGGCTGCAAGGAGTTCTGCCGCAAGGTGATCT
CTTCTGAGCCCAAGCAGCCGCTCACCCAGATCTCATCCATTGGGGAGTAT
GCCCCAGGTGGCCAGGTGGAGTACACGCATGTCCATCAGCGCAAATACTT
TCCCAAGTACGGAGGCGAATCCTATGGGGGATTGGTAGGACCAGTGGGCG
GACCCAAGGCCTATAAGCCATATCCATTGGTCTACGAACAGGCGGCATCA
GCTGCTTCACCGGCTTCCATTCCCTCGGTGGCTTCCTCACCAGCGGTGGC
CAGCATAGCTGCTCCTAATTACACGCTGGAGGAGTTGGCCCAATTGCTTA
GCACTGCGTATGGCACCAAGAAGGGCTACCCAGCTAGTGTGCCAACTCCG
CCACGTATTCAGCTTCAGCCAGCTCCCTCCGTTTTCTATTCCCCGGTTCC
AAGCTACAAAAAGCAAGTGGTTCCACTCGTGAGCAAAGTGGCGCCGGCAC
CCAAAATCTCCTCCAGCATTAAGTATGCCGCCTCAGCGGTTTCATCATCA
TCATCGGGCGTGTCGGTGGCCAAGATAAAGACTCCCTACGAGGAGAAGAT
TGTGGTGGCCACACCGTCTCCCATTTATGAGAGATCCACATCGTATCCTA
TTGTTGAAGCACCCAAGGAATACTCGGCGCCCCAGACGGAAGTCTATCCC
GTTGTGCAGAGCCAAACGGAGTCGTATCCCAGCCACACACCCATATATCC
AAGTCCCACGGAATCCTATCCCAGCCAAAAGGACTCCTACCCCAGCATCA
CAGAGTCATATCCCAGCCAAACTGAGTCCTATCAACCGCGTACGGAAGCC
TATCCCGTACCCCAACCGGAGATCAAGCCATATGGTGGTCCCGATTCTGG
ACCCGATAAGCCATCGTCCACGTTCGATCTGGCCATCGATAATTATCTGA
AGGACTTCGGATATGGCAACCAAGGAAGGGGATATGCGGACTACTAAAAG
CTTTCTAGACCAT

BS24822.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:51:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG13114-RB 1281 CG13114-PB 1..1281 17..1297 6405 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:51:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG13114-RB 1530 CG13114-RB 123..1404 17..1298 6410 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:51:44
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9546017..9547298 17..1298 6410 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:51:45 has no hits.

BS24822.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-23 17:08:47 Download gff for BS24822.complete
Subject Subject Range Query Range Percent Splice Strand
CG13114-RB 128..1401 22..1295 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:58:42 Download gff for BS24822.complete
Subject Subject Range Query Range Percent Splice Strand
CG13114-RB 128..1401 22..1295 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:21:47 Download gff for BS24822.complete
Subject Subject Range Query Range Percent Splice Strand
CG13114-RB 128..1401 22..1295 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:21:47 Download gff for BS24822.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9546022..9547295 22..1295 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:58:42 Download gff for BS24822.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9546022..9547295 22..1295 100   Plus

BS24822.pep Sequence

Translation from 16 to 1296

> BS24822.pep
MFERCNLLFMTMLMASALLTQAHFPEYCAECEQEVWEQVPCSEVPTTVAP
TTTGGSTLSPPTTSATSPGPIYPTTTSAPPTPTDYTTQPSEYKKCYCECK
LGCKEFCRKVISSEPKQPLTQISSIGEYAPGGQVEYTHVHQRKYFPKYGG
ESYGGLVGPVGGPKAYKPYPLVYEQAASAASPASIPSVASSPAVASIAAP
NYTLEELAQLLSTAYGTKKGYPASVPTPPRIQLQPAPSVFYSPVPSYKKQ
VVPLVSKVAPAPKISSSIKYAASAVSSSSSGVSVAKIKTPYEEKIVVATP
SPIYERSTSYPIVEAPKEYSAPQTEVYPVVQSQTESYPSHTPIYPSPTES
YPSQKDSYPSITESYPSQTESYQPRTEAYPVPQPEIKPYGGPDSGPDKPS
STFDLAIDNYLKDFGYGNQGRGYADY*

BS24822.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:35:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG13114-PB 426 CG13114-PB 1..426 1..426 2263 100 Plus