BS24867.complete Sequence
2012 bp assembled on 2011-07-19
GenBank Submission: KX805631
> BS24867.complete
GAAGTTATCAGTCGACATGGATATCCAACCACAGGCCTTGAAGCTGATCT
TCCTTTGGGCATGCCTGGCCATTGGGCTAACGGTGTTACCAGGAGCAACT
GCATCCGGACATGAGGCCAGTCCAGCTTCGAGGGATCTACTGAATCGCAG
CAAACGCACCATGACTACCATCTGCGTGGAGATTAGGCCAAGTAGTCCGC
AGGATGAGCCGTATTATATGTGCCGGGGAGCCAACTTCGGTGGCGACAGT
AGCCAGCAAAGTTGTGTGGAGGTCAGAAGCCAAGGTGGCCAGGGGGAGCC
ATTCTACATGTGCCAGGGAGCGAAATCCACAGAACCCGCAATCGAGAATC
AACCCTCCATGGAGCATATGCCTCCGTTTAATCCTCAACCCGCTGAACAT
CATGATTACGGTCACAACTTTCCCGTGTTTCCCGCCTTTGAGGGCGGGTC
ATATCCCCAGCAGCCCGTCACAGAAGATCCCACTCGCATTCTCCAAGTCC
AGCCAGCGGGTCCGACGTCATACCAGGAGAAGCCCCACCAGCAGCCTAAT
CCTCAGCAGCATCAGCCCCACGCCCAGTACGGATTCTACGGAGGCCCTAT
GGCAGCCCCTCCAACTGCACCTGCAGCGGAGTCAGCTGGCATGCAAGAAT
TTCATCACCCAATTGTGGGCAGCCCGCCAGCAGCTCCACCAGGAGTTCCA
GCTGGCCCAAGCCCAGCGTCCACGGCCGCTTCGTATGATCCTGCAGCATT
TGCGAGGTCGTCAAGTCGCCCCAACGAGAACCCAGTAGCCGGAAATGGTA
GACATCGATTCACTATCGACGAGGAGGTGCTGGCAGTGCCGGATGTGGGT
TTTAGGCGAGAGGAGCTCCAACAGCAATACCGTAGGCCAGTGAGTCAACC
GCGACCAGAAGATCAGTTGATGTGGGTGCCGTTGTCGCAGACGCAGGATC
CCGAAAACGATCCGGTTATGAAGGCATTCTACAGCAGCCTGGGAGACGAA
AGACATCCCACACAGGAGGCACCGGTGAGCAACCAGGATGAGCCCATGTT
GGGACAAATGTCTCCTGGCTACAGCCCCTACAACAATCAATACCCAGAGG
CTCCTGCCCCACCCACTCTGCCGCCACCACCTCCAACCTATTCCCAAGCA
GATGTAACTCCCTCTGCCAACACATATTGTAATGGATGTCCTCCCACAGC
ACCACCAATTCAATGTCCAGTGGACAACGGGGTGAGCTACAGTACCACCT
GTCCGAGCTTCCAACCGGTCATTATAAGCATGCCCTGCTACGCACAACGA
GCACCAACTCCCTACTTTGGGCTTCCCAGAGCACCACCAGCATTGGCTCC
AGCAGGTTCCTTTGGAGGTGGATTTGGGCTGGGAGCACAGCTGGGAAGCC
CTTTTGGCATGTCTCCCCAGATGGGAGGACAGGGATACGACATGGAGCAC
CAGGTGGGTGGCCCCTTTGGCATGGGCATGCAGCTTGGAATGGGAATGAA
CCCATTCGGACCCTTCGGAGCCCTCAATCCTTTCAATCCTTTCAACAGAG
TTCTGGGAGCACCAGCTCCCGCTGCTCCAACGCAAAATGGTAACTTTTTC
CAGCGCGTCTTCAAATTCAACCAGGACGCTGCCTCCACCTCAACAACAGA
AGCTGCTCCTACCACAGAAGTTCAATCGGAAAGATCGGGCAAGCTGAACT
TCTCGAGTAGCACTCCGGCGCCACCCAGCTCAGAACAGCCAGATACCATT
GTGGGTGATGACCACGACAGTGATGAGGCTGAGGACTCTGCTGAAGATTT
TGACAAGGAAGATGATACGGCGATGACCACACCGCTACCAGCCTCCGAGC
CAGATGATTCCGCTGACACATCCGGAGTTCCGGCCATTGTGAGCAAGGCG
ACGGAACTGCTCAAGCCAACGGAGAAACGGAAGCGACACCGTCAGCGCTC
CAGCGGACGTAGTCCCCAAAAGCATAGATACCTGCAGCAGTTGTAGAAGC
TTTCTAGACCAT
BS24867.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:02:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13992-RB | 1980 | CG13992-PB | 1..1980 | 17..1996 | 9900 | 100 | Plus |
| CG13992-RC | 1980 | CG13992-PC | 1..1980 | 17..1996 | 9900 | 100 | Plus |
| CG13992-RA | 1980 | CG13992-PA | 1..1980 | 17..1996 | 9900 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:02:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13992-RB | 2310 | CG13992-RB | 201..2182 | 15..1996 | 9910 | 100 | Plus |
| CG13992-RC | 2305 | CG13992-RC | 196..2177 | 15..1996 | 9910 | 100 | Plus |
| CG13992-RA | 2313 | CG13992-RA | 204..2185 | 15..1996 | 9910 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:02:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5965519..5967500 | 1996..15 | 9910 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:02:26 has no hits.
BS24867.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-19 12:59:57 Download gff for
BS24867.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13992-RB | 83..2062 | 17..1996 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:44:42 Download gff for
BS24867.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13992-RA | 206..2185 | 17..1996 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:49:27 Download gff for
BS24867.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13992-RA | 206..2185 | 17..1996 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:49:27 Download gff for
BS24867.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5965519..5967498 | 17..1996 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:44:42 Download gff for
BS24867.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5965519..5967498 | 17..1996 | 100 | | Minus |
BS24867.pep Sequence
Translation from 16 to 1995
> BS24867.pep
MDIQPQALKLIFLWACLAIGLTVLPGATASGHEASPASRDLLNRSKRTMT
TICVEIRPSSPQDEPYYMCRGANFGGDSSQQSCVEVRSQGGQGEPFYMCQ
GAKSTEPAIENQPSMEHMPPFNPQPAEHHDYGHNFPVFPAFEGGSYPQQP
VTEDPTRILQVQPAGPTSYQEKPHQQPNPQQHQPHAQYGFYGGPMAAPPT
APAAESAGMQEFHHPIVGSPPAAPPGVPAGPSPASTAASYDPAAFARSSS
RPNENPVAGNGRHRFTIDEEVLAVPDVGFRREELQQQYRRPVSQPRPEDQ
LMWVPLSQTQDPENDPVMKAFYSSLGDERHPTQEAPVSNQDEPMLGQMSP
GYSPYNNQYPEAPAPPTLPPPPPTYSQADVTPSANTYCNGCPPTAPPIQC
PVDNGVSYSTTCPSFQPVIISMPCYAQRAPTPYFGLPRAPPALAPAGSFG
GGFGLGAQLGSPFGMSPQMGGQGYDMEHQVGGPFGMGMQLGMGMNPFGPF
GALNPFNPFNRVLGAPAPAAPTQNGNFFQRVFKFNQDAASTSTTEAAPTT
EVQSERSGKLNFSSSTPAPPSSEQPDTIVGDDHDSDEAEDSAEDFDKEDD
TAMTTPLPASEPDDSADTSGVPAIVSKATELLKPTEKRKRHRQRSSGRSP
QKHRYLQQL*
BS24867.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:02:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13992-PB | 659 | CG13992-PB | 1..659 | 1..659 | 3579 | 100 | Plus |
| CG13992-PC | 659 | CG13992-PC | 1..659 | 1..659 | 3579 | 100 | Plus |
| CG13992-PA | 659 | CG13992-PA | 1..659 | 1..659 | 3579 | 100 | Plus |
| CG15021-PA | 420 | CG15021-PA | 32..328 | 128..449 | 165 | 24 | Plus |
