Clone BS24912 Report

Search the DGRC for BS24912

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:249
Well:12
Vector:pDNR-Dual
Associated Gene/TranscriptCG13989-RA
Protein status:BS24912.pep: full length peptide match
Sequenced Size:440

Clone Sequence Records

BS24912.complete Sequence

440 bp assembled on 2011-06-27

GenBank Submission: KX800585

> BS24912.complete
GAAGTTATCAGTCGACATGTACCATTCTTCAGGCCCATGTCGTGCCCACT
TCAGGCGATCCAGTCAGCGTGATCGGTTGCCCAGGCTGAGTAGCTCGTCC
ACCATGGATGTGGCACCTCGCTTTCAGAGAATACGACGCGGGAGCACTTG
CGAGGCGGAGAGGCGAGTGGCCAAGGCGGCCCAGGACGCCAATGTGCCGC
CGGCCAAGCTCTATCTACGCTCCACCTCACGGGGATTGCGTCGTGTCCTC
GAGATCTATATGCCACGATTCCAGCCCGACGAGCACTTGGCCAGCGCCGA
GGAGGAGCAGCGGTCAGAGGACGAACTTGGCGAGTCAGCCAGGACACGGG
AGCCACAGGAAGCTCTGCCCATTGCCACCAACTGGGCGGTGGTGAAGTGG
CGGACGTCGGATGCGGTCGCCTGAAAGCTTTCTAGACCAT

BS24912.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:20:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG13989-RA 408 CG13989-PA 1..408 17..424 2040 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:20:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG13989-RA 855 CG13989-RA 132..540 16..424 2045 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:20:28
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6160531..6160939 16..424 2045 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:20:30 has no hits.

BS24912.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:23:56 Download gff for BS24912.complete
Subject Subject Range Query Range Percent Splice Strand
CG13989-RA 89..495 17..423 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:59:39 Download gff for BS24912.complete
Subject Subject Range Query Range Percent Splice Strand
CG13989-RA 133..539 17..423 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:39:12 Download gff for BS24912.complete
Subject Subject Range Query Range Percent Splice Strand
CG13989-RA 133..539 17..423 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:39:12 Download gff for BS24912.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6160532..6160938 17..423 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:59:39 Download gff for BS24912.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6160532..6160938 17..423 100   Plus

BS24912.pep Sequence

Translation from 16 to 423

> BS24912.pep
MYHSSGPCRAHFRRSSQRDRLPRLSSSSTMDVAPRFQRIRRGSTCEAERR
VAKAAQDANVPPAKLYLRSTSRGLRRVLEIYMPRFQPDEHLASAEEEQRS
EDELGESARTREPQEALPIATNWAVVKWRTSDAVA*

BS24912.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:35:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG13989-PA 135 CG13989-PA 1..135 1..135 693 100 Plus