BS24915.complete Sequence
611 bp assembled on 2011-06-27
GenBank Submission: KX802326
> BS24915.complete
GAAGTTATCAGTCGACATGATGTCCAGGAAAGGCAATCAACTCCACCCGT
CATCAATCCGTCCATCATCGACCACACCGGACTGCAATCAGAAGCGGCGA
GGCGACATGACAGCTCCTCCTCCGAACCCAAAGCCAGAGAAAAGCCGCAT
CATGGAGATGCATGCGATTTTTCTGGGGCACGACACTCGCGGCGACAATA
AGATATCCATCCGGCACCTGGGCCATTGTCTGCGTGCGATGGGCGCCACT
CCCACGGAGGCGATGGTCAGCAAACATGTCCGCCAGTACGAGGCCTCCAC
CATGCAGCGCATATGCTTCGATGAGGTCATGGGCATCTACTCCAGTCTTG
GCAAGCACGGCGGCATGTTGTCTCCCAAGAAAAAACAGATCGAGGCGGAC
CAGTTCGTATCCAGTCTAAGGGTCTTTGATACGGATAAGTCCGGTTGGAT
TCCCGCCATCAGACTCCGGCGCATTCTAACCAAGACCGGGGAGTGCATGG
GCAGCATGGAAGTGGACGAGCTGCTCCAGGGTAGGATCAACAAAGACGGC
TTGGTCGACTACAAGAAGCTGGTTCAAGACATTATCTATGGGTAAAAGCT
TTCTAGACCAT
BS24915.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:25:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17237-RA | 579 | CG17237-PA | 1..579 | 17..595 | 2880 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:25:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17237-RA | 914 | CG17237-RA | 210..788 | 17..595 | 2880 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:25:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 2288629..2289207 | 595..17 | 2880 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:25:55 has no hits.
BS24915.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:24:01 Download gff for
BS24915.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17237-RA | 164..740 | 17..593 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:00:48 Download gff for
BS24915.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17237-RA | 210..786 | 17..593 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:41:08 Download gff for
BS24915.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17237-RA | 210..786 | 17..593 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:41:08 Download gff for
BS24915.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2288631..2289207 | 17..593 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:00:48 Download gff for
BS24915.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 2288631..2289207 | 17..593 | 99 | | Minus |
BS24915.pep Sequence
Translation from 16 to 594
> BS24915.pep
MMSRKGNQLHPSSIRPSSTTPDCNQKRRGDMTAPPPNPKPEKSRIMEMHA
IFLGHDTRGDNKISIRHLGHCLRAMGATPTEAMVSKHVRQYEASTMQRIC
FDEVMGIYSSLGKHGGMLSPKKKQIEADQFVSSLRVFDTDKSGWIPAIRL
RRILTKTGECMGSMEVDELLQGRINKDGLVDYKKLVQDIIYG*
BS24915.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:36:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17237-PA | 192 | CG17237-PA | 1..192 | 1..192 | 1011 | 100 | Plus |
Mlc-c-PA | 147 | CG3201-PA | 6..147 | 42..192 | 220 | 33.8 | Plus |
Mlc-c-PB | 153 | CG3201-PB | 17..153 | 47..192 | 217 | 34.9 | Plus |
Cam-PD | 149 | CG8472-PD | 7..143 | 42..186 | 172 | 30.6 | Plus |
Cam-PC | 149 | CG8472-PC | 7..143 | 42..186 | 172 | 30.6 | Plus |