Clone BS24915 Report

Search the DGRC for BS24915

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:249
Well:15
Vector:pDNR-Dual
Associated Gene/TranscriptCG17237-RA
Protein status:BS24915.pep: full length peptide match
Sequenced Size:611

Clone Sequence Records

BS24915.complete Sequence

611 bp assembled on 2011-06-27

GenBank Submission: KX802326

> BS24915.complete
GAAGTTATCAGTCGACATGATGTCCAGGAAAGGCAATCAACTCCACCCGT
CATCAATCCGTCCATCATCGACCACACCGGACTGCAATCAGAAGCGGCGA
GGCGACATGACAGCTCCTCCTCCGAACCCAAAGCCAGAGAAAAGCCGCAT
CATGGAGATGCATGCGATTTTTCTGGGGCACGACACTCGCGGCGACAATA
AGATATCCATCCGGCACCTGGGCCATTGTCTGCGTGCGATGGGCGCCACT
CCCACGGAGGCGATGGTCAGCAAACATGTCCGCCAGTACGAGGCCTCCAC
CATGCAGCGCATATGCTTCGATGAGGTCATGGGCATCTACTCCAGTCTTG
GCAAGCACGGCGGCATGTTGTCTCCCAAGAAAAAACAGATCGAGGCGGAC
CAGTTCGTATCCAGTCTAAGGGTCTTTGATACGGATAAGTCCGGTTGGAT
TCCCGCCATCAGACTCCGGCGCATTCTAACCAAGACCGGGGAGTGCATGG
GCAGCATGGAAGTGGACGAGCTGCTCCAGGGTAGGATCAACAAAGACGGC
TTGGTCGACTACAAGAAGCTGGTTCAAGACATTATCTATGGGTAAAAGCT
TTCTAGACCAT

BS24915.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:25:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG17237-RA 579 CG17237-PA 1..579 17..595 2880 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:25:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG17237-RA 914 CG17237-RA 210..788 17..595 2880 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:25:53
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2288629..2289207 595..17 2880 99.8 Minus
Blast to na_te.dros performed on 2014-11-26 15:25:55 has no hits.

BS24915.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:24:01 Download gff for BS24915.complete
Subject Subject Range Query Range Percent Splice Strand
CG17237-RA 164..740 17..593 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:00:48 Download gff for BS24915.complete
Subject Subject Range Query Range Percent Splice Strand
CG17237-RA 210..786 17..593 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:41:08 Download gff for BS24915.complete
Subject Subject Range Query Range Percent Splice Strand
CG17237-RA 210..786 17..593 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:41:08 Download gff for BS24915.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2288631..2289207 17..593 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:00:48 Download gff for BS24915.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2288631..2289207 17..593 99   Minus

BS24915.pep Sequence

Translation from 16 to 594

> BS24915.pep
MMSRKGNQLHPSSIRPSSTTPDCNQKRRGDMTAPPPNPKPEKSRIMEMHA
IFLGHDTRGDNKISIRHLGHCLRAMGATPTEAMVSKHVRQYEASTMQRIC
FDEVMGIYSSLGKHGGMLSPKKKQIEADQFVSSLRVFDTDKSGWIPAIRL
RRILTKTGECMGSMEVDELLQGRINKDGLVDYKKLVQDIIYG*

BS24915.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:36:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG17237-PA 192 CG17237-PA 1..192 1..192 1011 100 Plus
Mlc-c-PA 147 CG3201-PA 6..147 42..192 220 33.8 Plus
Mlc-c-PB 153 CG3201-PB 17..153 47..192 217 34.9 Plus
Cam-PD 149 CG8472-PD 7..143 42..186 172 30.6 Plus
Cam-PC 149 CG8472-PC 7..143 42..186 172 30.6 Plus