BS24920.complete Sequence
593 bp assembled on 2011-06-27
GenBank Submission: KX800250
> BS24920.complete
GAAGTTATCAGTCGACATGGCTGAAGTCCTAGAGGAATTCATCACCCTAA
CGCCCTTGACTTGTGTGCAACAATGCAATGCTTTACTAGGCTCAACATCA
GGAAAGCCGAGAAGCTGCTCCGTATTTTTTACACTATTTGGCGTATACTG
CGGCGTTCTCATCTTTCGGGCGTATCGCACATATTCCTCTAAGCAAGAAA
GAGACGAGGAAAAGATAACCGAAGGAGTTACCCTTGAGGCTAAGGAGGAA
GATTTGATCATAGGACCTGGTTCCAGTCTTGTGAACGAATATGTAGAACA
AACGAAGCCGATTCTGTTGCAACCCGTCGGTTTTTCCAGTACTGACATGA
GATGGCGCTATTGCAACCACTTGCCGGAAGCAGAATTAGCACAAGGCTCT
GATAGTGAAAACAGATCAACCGAAAGAGATGACATTGATAACCTCGAAAG
GATGAGCAATGTTGTGGATGATAATGATGCGCAGAAGCCAGTTGCATCCA
CATCGATGGCAACGGCTCGGGCGCCTGAGGATAACGCCGATGGTGAGCAC
GTCGAGCCCACACCATTTTCGGTGTGAAAGCTTTCTAGACCAT
BS24920.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:29:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30355-RA | 561 | CG30355-PA | 1..561 | 17..577 | 2775 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:29:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30355-RA | 751 | CG30355-RA | 121..688 | 12..579 | 2795 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:29:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8679494..8679833 | 351..12 | 1685 | 99.7 | Minus |
2R | 25286936 | 2R | 8679209..8679438 | 579..350 | 1120 | 99.1 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:29:33 has no hits.
BS24920.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:24:03 Download gff for
BS24920.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30355-RA | 121..680 | 17..576 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:01:26 Download gff for
BS24920.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30355-RA | 126..685 | 17..576 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:42:34 Download gff for
BS24920.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30355-RA | 126..685 | 17..576 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:42:34 Download gff for
BS24920.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8679212..8679436 | 352..576 | 99 | <- | Minus |
2R | 8679494..8679828 | 17..351 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:01:26 Download gff for
BS24920.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4566717..4566941 | 352..576 | 99 | <- | Minus |
arm_2R | 4566999..4567333 | 17..351 | 100 | | Minus |
BS24920.pep Sequence
Translation from 16 to 576
> BS24920.pep
MAEVLEEFITLTPLTCVQQCNALLGSTSGKPRSCSVFFTLFGVYCGVLIF
RAYRTYSSKQERDEEKITEGVTLEAKEEDLIIGPGSSLVNEYVEQTKPIL
LQPVGFSSTDMRWRYCNHLPEAELAQGSDSENRSTERDDIDNLERMSNVV
DDNDAQKPVASTSMATARAPEDNADGEHVEPTPFSV*
BS24920.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:36:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30355-PA | 186 | CG30355-PA | 1..186 | 1..186 | 964 | 100 | Plus |