Clone BS24920 Report

Search the DGRC for BS24920

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:249
Well:20
Vector:pDNR-Dual
Associated Gene/TranscriptCG30355-RA
Protein status:BS24920.pep: full length peptide match
Sequenced Size:593

Clone Sequence Records

BS24920.complete Sequence

593 bp assembled on 2011-06-27

GenBank Submission: KX800250

> BS24920.complete
GAAGTTATCAGTCGACATGGCTGAAGTCCTAGAGGAATTCATCACCCTAA
CGCCCTTGACTTGTGTGCAACAATGCAATGCTTTACTAGGCTCAACATCA
GGAAAGCCGAGAAGCTGCTCCGTATTTTTTACACTATTTGGCGTATACTG
CGGCGTTCTCATCTTTCGGGCGTATCGCACATATTCCTCTAAGCAAGAAA
GAGACGAGGAAAAGATAACCGAAGGAGTTACCCTTGAGGCTAAGGAGGAA
GATTTGATCATAGGACCTGGTTCCAGTCTTGTGAACGAATATGTAGAACA
AACGAAGCCGATTCTGTTGCAACCCGTCGGTTTTTCCAGTACTGACATGA
GATGGCGCTATTGCAACCACTTGCCGGAAGCAGAATTAGCACAAGGCTCT
GATAGTGAAAACAGATCAACCGAAAGAGATGACATTGATAACCTCGAAAG
GATGAGCAATGTTGTGGATGATAATGATGCGCAGAAGCCAGTTGCATCCA
CATCGATGGCAACGGCTCGGGCGCCTGAGGATAACGCCGATGGTGAGCAC
GTCGAGCCCACACCATTTTCGGTGTGAAAGCTTTCTAGACCAT

BS24920.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:29:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG30355-RA 561 CG30355-PA 1..561 17..577 2775 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:29:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG30355-RA 751 CG30355-RA 121..688 12..579 2795 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:29:31
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8679494..8679833 351..12 1685 99.7 Minus
2R 25286936 2R 8679209..8679438 579..350 1120 99.1 Minus
Blast to na_te.dros performed on 2014-11-26 15:29:33 has no hits.

BS24920.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:24:03 Download gff for BS24920.complete
Subject Subject Range Query Range Percent Splice Strand
CG30355-RA 121..680 17..576 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:01:26 Download gff for BS24920.complete
Subject Subject Range Query Range Percent Splice Strand
CG30355-RA 126..685 17..576 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:42:34 Download gff for BS24920.complete
Subject Subject Range Query Range Percent Splice Strand
CG30355-RA 126..685 17..576 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:42:34 Download gff for BS24920.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8679212..8679436 352..576 99 <- Minus
2R 8679494..8679828 17..351 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:01:26 Download gff for BS24920.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4566717..4566941 352..576 99 <- Minus
arm_2R 4566999..4567333 17..351 100   Minus

BS24920.pep Sequence

Translation from 16 to 576

> BS24920.pep
MAEVLEEFITLTPLTCVQQCNALLGSTSGKPRSCSVFFTLFGVYCGVLIF
RAYRTYSSKQERDEEKITEGVTLEAKEEDLIIGPGSSLVNEYVEQTKPIL
LQPVGFSSTDMRWRYCNHLPEAELAQGSDSENRSTERDDIDNLERMSNVV
DDNDAQKPVASTSMATARAPEDNADGEHVEPTPFSV*

BS24920.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:36:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG30355-PA 186 CG30355-PA 1..186 1..186 964 100 Plus