BS24928.complete Sequence
1208 bp assembled on 2011-06-27
GenBank Submission: KX806474
> BS24928.complete
GAAGTTATCAGTCGACATGAACACCCTGCGGAAACTGAATAGCCTGCCGC
CCTTCAGATCGGTGGGCGGTGCTTATCGTCTGTTTGCTGGCAAGGATCAG
AAGAAGGATTCCGCGGGGCAGAAGACCAGACAGCCGGAAAAGCCACCACA
AGATAAGCAGAAGAGTAAGGGTGCTAGTGGCAAAGCAAAGAGTGCTGGGT
CAACTGACTCCGCCAAGAAGACCACCAAGGTTACCCTGATCAACGGCGAG
GGCGTGGGACGAGAGCTGATGGACGCGGTGCAAGAGGTAATATGTGCTGT
GAAGGCCCCAATAGAGTGGGATGTCCACGATGAGTTCAAGGCCAAGGACA
GCGATGATGTGTCCCCGGAGGTCCTTAAGTCCTTGCGAGCCAATAAGGTT
GGCATTAAGGGACCCGTGGATAGTCGTCACTGGCAGCGCCAGATCCGCAA
GCAGTTCGCCCAGTTCGCCTACGTGTCATTGTGCTCCCACATCGAGGGAC
TGGACTCGCCCTACGGCGACTTCGACGTTGTGATCATCCGGGACCAGATG
GAGGGCGACTACTCTGGCATCGAGCATCTGGTGGTCCCGGGTGTCATGCA
GACCATTAAGGTAAGCACCACGGCCGGAGCGGCCAGGATCGCTGAGTTCG
TCTTCAACTACGCCGTGAAGAACAAGCGCAAAAGGATCACGGTGGCCCAC
AAGGCCAACATCATGCGGATGACGGACGGCAATTTCCTGGAGGCCATGCG
GGCGGAGGCCGACAAGCACGTGGACGACGTTTTGTTCGAGGAGCGCTACC
TGGACACCTGCATTCTGAAGATCCTGCTGAAGCCCCACAAGTGCGACGTG
ATGGTCTCGTCCAGCATGTACGGCGACGTGCTGCGGGTGATAGCCGGCGG
CATGATGGGCGTGCCGGGCATCTGTCCCGGCTACTCCGTCAGTTCCCTGG
GCACCGTGTTCGACTGCCGGATGAAGGCGTGCCACGCCCTCGCGGGCAAG
GACCTGGCCAATCCCACGGGACCCCTGCTCAGCGCCGCCCTAATGCTGCG
CCACGTGAAGATGGACAAGCAGGCGGACCAAGTCGACTGCGCCATTCGCA
AGGTCTACAAGGACACCGATATCCGCACCCCGGATGTGGGCGGCAAGGCC
AAGTGCTCAGAGTTCGTTAAGGCCGTGTGTGATTGCCTCTAAAAGCTTTC
TAGACCAT
BS24928.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:34:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3483-RA | 1176 | CG3483-PA | 1..1176 | 17..1192 | 5805 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:34:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3483-RA | 1340 | CG3483-RA | 54..1229 | 17..1192 | 5805 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:34:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24445553..24446728 | 17..1192 | 5805 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:34:40 has no hits.
BS24928.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:24:07 Download gff for
BS24928.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3483-RA | 54..1227 | 17..1190 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:02:25 Download gff for
BS24928.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3483-RA | 54..1227 | 17..1190 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:44:33 Download gff for
BS24928.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3483-RA | 54..1227 | 17..1190 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:44:33 Download gff for
BS24928.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24445553..24446726 | 17..1190 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:02:25 Download gff for
BS24928.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20333076..20334249 | 17..1190 | 99 | | Plus |
BS24928.pep Sequence
Translation from 16 to 1191
> BS24928.pep
MNTLRKLNSLPPFRSVGGAYRLFAGKDQKKDSAGQKTRQPEKPPQDKQKS
KGASGKAKSAGSTDSAKKTTKVTLINGEGVGRELMDAVQEVICAVKAPIE
WDVHDEFKAKDSDDVSPEVLKSLRANKVGIKGPVDSRHWQRQIRKQFAQF
AYVSLCSHIEGLDSPYGDFDVVIIRDQMEGDYSGIEHLVVPGVMQTIKVS
TTAGAARIAEFVFNYAVKNKRKRITVAHKANIMRMTDGNFLEAMRAEADK
HVDDVLFEERYLDTCILKILLKPHKCDVMVSSSMYGDVLRVIAGGMMGVP
GICPGYSVSSLGTVFDCRMKACHALAGKDLANPTGPLLSAALMLRHVKMD
KQADQVDCAIRKVYKDTDIRTPDVGGKAKCSEFVKAVCDCL*
BS24928.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:37:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3483-PA | 391 | CG3483-PA | 1..391 | 1..391 | 2030 | 100 | Plus |
| l(1)G0156-PC | 354 | CG12233-PC | 12..351 | 57..388 | 677 | 41.6 | Plus |
| l(1)G0156-PA | 354 | CG12233-PA | 12..351 | 57..388 | 677 | 41.6 | Plus |
| l(1)G0156-PD | 377 | CG12233-PD | 35..374 | 57..388 | 677 | 41.6 | Plus |
| CG32026-PA | 719 | CG32026-PA | 318..714 | 11..387 | 599 | 34.3 | Plus |
