Clone BS24932 Report

Search the DGRC for BS24932

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:249
Well:32
Vector:pDNR-Dual
Associated Gene/TranscriptCG31875-RA
Protein status:BS24932.pep: gold
Sequenced Size:518

Clone Sequence Records

BS24932.complete Sequence

518 bp assembled on 2011-08-23

GenBank Submission: KX801431

> BS24932.complete
GAAGTTATCAGTCGACATGTCGGCACGCAAGGAGAAACGAGACATACATT
ACTGGCGAAAACAGGCAGCCACCTTGCCGGATTTTGTGCCGCCGTGGAAG
CGGGAACAGGATTTGCAGCAGCTGCAACATCGAGCCTCGATCCTGTGGTC
GCCGCAACTGCAGGACCAAGATGACAAGGCTGTTCGCGAATACCTTGACT
ATGCGGCCAGTCTCTATGATATCGAGGAGGAGCAGGCGCTGTTCATCCTG
CGGCGTCACGGATACGACCTGCCCCTGGCACATCGACGTCTGGAGAAGAC
TGAGACAGCTCGAGGATGTCGCTACCATCGCTGGAAGGCCGAGGATCTCA
TCCGTCTTACCAAGGCCTTCGAGCAATACGGCACCGACTTCGCAAAGGTA
CGAAAGGAGCTACCCCACTTTCCCCTGGCCGAGCTTCGGCTGTACTTCTC
CTTCATGTCCTCGGCGTTGGAGACAGATGACCAACAGGCCATCCATAGAT
GAAAGCTTTCTAGACCAT

BS24932.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:59:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG31875-RD 486 CG31875-PD 1..486 17..502 2400 99.6 Plus
CG31875-RC 486 CG31875-PC 1..486 17..502 2400 99.6 Plus
CG31875-RB 486 CG31875-PB 1..486 17..502 2400 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:59:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG31875-RB 1179 CG31875-RB 244..734 12..502 2410 99.4 Plus
CG31875-RD 1241 CG31875-RD 311..796 17..502 2400 99.6 Plus
CG31875-RC 1363 CG31875-RC 433..918 17..502 2400 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:59:46
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9996006..9996491 502..17 2400 99.6 Minus
Blast to na_te.dros performed 2014-11-27 06:59:47
Subject Length Description Subject Range Query Range Score Percent Strand
Stalker4 7359 Stalker4 STALKER4 7359bp 854..962 299..405 108 60.7 Plus

BS24932.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-23 17:56:41 Download gff for BS24932.complete
Subject Subject Range Query Range Percent Splice Strand
CG31875-RB 146..630 17..501 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:01:49 Download gff for BS24932.complete
Subject Subject Range Query Range Percent Splice Strand
CG31875-RB 249..733 17..501 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:00:17 Download gff for BS24932.complete
Subject Subject Range Query Range Percent Splice Strand
CG31875-RB 249..733 17..501 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:00:17 Download gff for BS24932.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9996007..9996491 17..501 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:01:49 Download gff for BS24932.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9996007..9996491 17..501 99   Minus

BS24932.pep Sequence

Translation from 16 to 501

> BS24932.pep
MSARKEKRDIHYWRKQAATLPDFVPPWKREQDLQQLQHRASILWSPQLQD
QDDKAVREYLDYAASLYDIEEEQALFILRRHGYDLPLAHRRLEKTETARG
CRYHRWKAEDLIRLTKAFEQYGTDFAKVRKELPHFPLAELRLYFSFMSSA
LETDDQQAIHR*

BS24932.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:20:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG31875-PD 161 CG31875-PD 1..161 1..161 856 100 Plus
CG31875-PC 161 CG31875-PC 1..161 1..161 856 100 Plus
CG31875-PB 161 CG31875-PB 1..161 1..161 856 100 Plus
CG31875-PA 161 CG31875-PA 1..161 1..161 856 100 Plus