BS24938.complete Sequence
1082 bp assembled on 2011-06-28
GenBank Submission: KX802272
> BS24938.complete
GAAGTTATCAGTCGACATGTTGTTACTGACAAGTCTTAAAAGCCTGGCAA
AACCAGCTACATGGGGAGTTGTGGTCCGCACTTTAAAGGTCGCCGTTGTC
GGTGCCGGAGGAGGAATTGGACAACCGCTATCGCTTCTGCTCCGTCGCTG
TCCTGGAATCGATGAGCTGGCTCTACATGATCTCAGCGAAATGAAGGGAA
TTGCTACGGATCTATCCCATATAAGCCAAACGGGAAAGGTGATAGGTTTT
ACCGGTGAAAAGGAACTGGAGTCGGCGGTGAGTGGAGCTGATGTGGTGGT
TGTGGCGGCAGGAATGCCACGTCTGCCAGGAATGCAAAGGGATCACCTGA
TGGCCGCCAATGGAAATGTTGCAGTGAAAGTTGCCACTGCCATTAGCAAT
GCCTCTCCACGAGCTCATCTTGCCTTTATTACCAATCCGGTCAATATGAT
TGTGCCCGCCGCAGCTGAGGTTCTTATGGCCCATGGAACTTTTGATTCTC
GTCGGCTCTTCGGTATTACGACTTTGGATGTGGTGCGATCGAAAAAGTTC
ATTGGTGATTCTATGAACATATCACCGGATGACGTAAACATTCCAGTTAT
TGGTGGCCATGCGGGGATTACAATTCTACCGCTCATTTCGCAGTGTCAGC
CGATATATAGATGTGATCTCCAGGAGATCCAGAATCTAACTCATCGCATT
CAGGAGGCGGGCACAGAGGTGGTGAATGCCAAAGCTGGAAAAGGATCTGC
CACCCTATCGATGGCTTATGCTGGCGCAACTTTCGTGAACTCCCTGCTGC
GTGGAATTGCTGGACAGGATGGTCTAATCGAGTGCGCTTTTGTCGCCTCC
AAACTAACCGACGCCCCATTCTTTGCTAGTCCATTGGAATTGGGAAAGGA
TGGTATCAAGCGCTATATACCACTTCCCCAGATGAGTGACTACGAAAAGG
AGGCTTTGGAAAAGCTGCTACCTATTCTACGACAGAATGCTGATGAGGGT
GTCAATTTTGCAAAAATGATTTTGAGTGGACAATCACATTCTCCCATTCC
AGCGGCCTTGCCGTAAAAGCTTTCTAGACCAT
BS24938.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:22:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10748-RA | 1050 | CG10748-PA | 1..1050 | 17..1066 | 5220 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:22:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10748-RA | 1146 | CG10748-RA | 29..1080 | 17..1068 | 5230 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:22:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 12971280..12972331 | 1068..17 | 5230 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:22:33 has no hits.
BS24938.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-28 12:44:09 Download gff for
BS24938.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10748-RA | 34..1076 | 22..1064 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:59:16 Download gff for
BS24938.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10748-RA | 34..1076 | 22..1064 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:17:33 Download gff for
BS24938.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10748-RA | 34..1076 | 22..1064 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:17:33 Download gff for
BS24938.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12971284..12972326 | 22..1064 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:59:16 Download gff for
BS24938.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 12964384..12965426 | 22..1064 | 99 | | Minus |
BS24938.pep Sequence
Translation from 16 to 1065
> BS24938.pep
MLLLTSLKSLAKPATWGVVVRTLKVAVVGAGGGIGQPLSLLLRRCPGIDE
LALHDLSEMKGIATDLSHISQTGKVIGFTGEKELESAVSGADVVVVAAGM
PRLPGMQRDHLMAANGNVAVKVATAISNASPRAHLAFITNPVNMIVPAAA
EVLMAHGTFDSRRLFGITTLDVVRSKKFIGDSMNISPDDVNIPVIGGHAG
ITILPLISQCQPIYRCDLQEIQNLTHRIQEAGTEVVNAKAGKGSATLSMA
YAGATFVNSLLRGIAGQDGLIECAFVASKLTDAPFFASPLELGKDGIKRY
IPLPQMSDYEKEALEKLLPILRQNADEGVNFAKMILSGQSHSPIPAALP*
BS24938.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:52:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10748-PA | 349 | CG10748-PA | 1..349 | 1..349 | 1753 | 100 | Plus |
Mdh2-PA | 336 | CG7998-PA | 26..334 | 24..332 | 856 | 52.4 | Plus |
CG10749-PA | 347 | CG10749-PA | 22..340 | 17..333 | 831 | 52 | Plus |