Clone BS24943 Report

Search the DGRC for BS24943

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:249
Well:43
Vector:pDNR-Dual
Associated Gene/TranscriptCG17669-RA
Protein status:BS24943.pep: full length peptide match
Sequenced Size:1655

Clone Sequence Records

BS24943.complete Sequence

1655 bp assembled on 2011-07-01

GenBank Submission: KX802555

> BS24943.complete
GAAGTTATCAGTCGACATGCTGTGGGGAATCAGTTCCGCGCTTGATTTAT
ACGAGGAGTACCTAAGGGCCTTCAAGATCAAGGACGACCCGCTGCCGGAG
GATGAGCATGCACGCGAGGAAGCAGAAGAAGCGGCCGGAGATAATACTTT
GAACACCCTAAACATACTCATCTGCGGTGGAGCTGATCCACGGCATGTGA
TCAAGACGCTGGCCAAGAGATACACACATCGCATCCGACCCAAACTAAAT
ATCTATTTACTCGATGGTTGCGCCGAAATTGAAGCCAGGAACATGCTGCT
CCTGGGCGTAGCCCTGGAGGATCCCGAGTCCTTTAACCTGGTGTCCAAGG
TGCACTTGTTCATGGACCTCTACGGAAATGCGGTGATCCGTCCCAGCTCG
CACCATTACATGGCAGCCAAGGGACGCACACTGCTCAAAATGGTCACCAA
TGAGGAGGAACTTCAGCGCCTGGCTCCCATGCTGAATATAGAAGGACTAA
AGTACAAGGAACGAGATGGCTTTGAGATGGCTTTCACTTTTTGGCAGCCG
CAACCGTGGAATGTCTTTGAGGTGACCGCCTACTGGGAGCAAAGGTCGAG
GGCCCTGCTCGGCACCAGGTATGACCATCGCAACGGGGCCTTTGATTGGG
ACCTGAGCATGACCCTAAAGGAACGTGGAGGGCAGCAGATCTGTTCGCAG
GAGTACCGCTATTGGCGCGAGACCGGCGTGGCTTTCGTTTTTCCGGAATA
TGAGCATTGCAAGCCGAACAAGACACTGGCCGTTGGATTGGTGCGCAATG
GACGCAACTTCATCCACCGTGGCTATGTGGGTGATATCCAGACTGGACCG
TTTTGTGGCTTCGGGCTGCGCACCGTGGAGGAGCGAATGCATCATTCTGT
GCACGGTGATAATGATTATCGTGCTACCGATATAACAGAACGCAATCTCA
TGGAATTCTTCCATGAATTGCTGACCCAGACAGCCTACGAGCATGATACC
ACTCGTTCCCGACGGTATGGCTCTGTTCAGCTGCTGATGACGCCCTTGTT
GAACCACCAGGAAGAGGACGCTGCTGGGCAAGCGGCTTACGATAAGCCAT
GGATCCACGTGCCCGGAGTAACAGTGCACTTTGTGTCGCCCATGGAGATG
GAGCAGCTGAAAAAGGGTGCAGCTCATTGGAACAATATGTTTGATATCGT
CTTTATGGCCTATAACTATTACTCTTTCTTGAGCAAGGACTTCTTCCAGG
CGATGCGTGCGCAATCACTTTTTATTCTGGAAACCAAGCTGATGACGGTG
GAGCGCAAAGATCGTGTGCAGGAGTACGAATCCAAAGCTAAAGAACTGAT
GAAGGATGCTGGCCTTAAGGCGGCCATCAACTACCAGGCCATCAACGGCA
AGAACATGTGGCTAAAATACAAAAAGACCGATAAAGATGAACAAGAAGAT
GAAGCCGTGACAGAAGCCATGCCAGAAAGTACTTTCAAATATGACACAGA
CACAGATTATGGTGAACCTGCTGAAGAGTATACTGGTCTAGTAATTGAAG
AGATTCCCTCATCGAATCAGACTGTGGCAGCCATTAAGAAGGAAGTGGAG
GCAGAAGGTCCCCTACAACCAAAAACTAACTTCCCATGAAAGCTTTCTAG
ACCAT

BS24943.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:43:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG17669-RA 1623 CG17669-PA 1..1623 17..1639 8085 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:43:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG17669-RA 1726 CG17669-RA 64..1687 17..1640 8090 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:43:00
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18452776..18454399 1640..17 8090 99.9 Minus
Blast to na_te.dros performed 2014-11-26 16:43:01
Subject Length Description Subject Range Query Range Score Percent Strand
TART-B 10654 TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). 8466..8661 1270..1469 152 57.1 Plus

BS24943.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-01 14:24:39 Download gff for BS24943.complete
Subject Subject Range Query Range Percent Splice Strand
CG17669-RA 64..1685 17..1638 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:07:54 Download gff for BS24943.complete
Subject Subject Range Query Range Percent Splice Strand
CG17669-RA 64..1685 17..1638 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:25:46 Download gff for BS24943.complete
Subject Subject Range Query Range Percent Splice Strand
CG17669-RA 64..1685 17..1638 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:25:46 Download gff for BS24943.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18452778..18454399 17..1638 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:07:54 Download gff for BS24943.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14340283..14341904 17..1638 99   Minus

BS24943.pep Sequence

Translation from 16 to 1638

> BS24943.pep
MLWGISSALDLYEEYLRAFKIKDDPLPEDEHAREEAEEAAGDNTLNTLNI
LICGGADPRHVIKTLAKRYTHRIRPKLNIYLLDGCAEIEARNMLLLGVAL
EDPESFNLVSKVHLFMDLYGNAVIRPSSHHYMAAKGRTLLKMVTNEEELQ
RLAPMLNIEGLKYKERDGFEMAFTFWQPQPWNVFEVTAYWEQRSRALLGT
RYDHRNGAFDWDLSMTLKERGGQQICSQEYRYWRETGVAFVFPEYEHCKP
NKTLAVGLVRNGRNFIHRGYVGDIQTGPFCGFGLRTVEERMHHSVHGDND
YRATDITERNLMEFFHELLTQTAYEHDTTRSRRYGSVQLLMTPLLNHQEE
DAAGQAAYDKPWIHVPGVTVHFVSPMEMEQLKKGAAHWNNMFDIVFMAYN
YYSFLSKDFFQAMRAQSLFILETKLMTVERKDRVQEYESKAKELMKDAGL
KAAINYQAINGKNMWLKYKKTDKDEQEDEAVTEAMPESTFKYDTDTDYGE
PAEEYTGLVIEEIPSSNQTVAAIKKEVEAEGPLQPKTNFP*

BS24943.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:55:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG17669-PA 540 CG17669-PA 1..540 1..540 2874 100 Plus