Clone BS24950 Report

Search the DGRC for BS24950

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:249
Well:50
Vector:pDNR-Dual
Associated Gene/TranscriptCG14391-RA
Protein status:BS24950.pep: full length peptide match
Sequenced Size:440

Clone Sequence Records

BS24950.complete Sequence

440 bp assembled on 2011-06-27

GenBank Submission: KX801183

> BS24950.complete
GAAGTTATCAGTCGACATGGAATTTGCCATACCAGAGGCTCAGTACTGGG
ACGTTTCGAAGAAATCCCAAAAAGATCGTCAGATGATTCGTAAATTCGTG
CCCGAGGCGGTCGACCTGGCCACCATAAGTCGTGCAGAGATCTACAGGAT
TGACACATTCTATTTGGAGTGCCAAAAGTACCGGGATCACTATCGTGACC
CCTACGGCAAGGTCCACTGTCCGGCATTCTTCCACCTGCACAAGGGCAAG
TGCGGAATCAAGCTGGACCAGAGCGTCATCAAGATGACGCAGGCGATTGC
CGCAACTGTGGACCGGCAGCCCATAGTTTTTCCCCTGATTCCGAACAAGA
GCATGTTTTTGGGTGGTAGCATTCCCATGGGGTCACAAACATCCCAAGTT
GGCGTCACTAGCTATCTCAGATGAAAGCTTTCTAGACCAT

BS24950.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:41:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG14391-RA 408 CG14391-PA 1..408 17..424 2040 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:41:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG14391-RA 614 CG14391-RA 95..504 16..425 2050 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:41:36
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12694339..12694748 425..16 2050 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:41:37 has no hits.

BS24950.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:24:12 Download gff for BS24950.complete
Subject Subject Range Query Range Percent Splice Strand
CG14391-RA 96..502 17..423 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:03:40 Download gff for BS24950.complete
Subject Subject Range Query Range Percent Splice Strand
CG14391-RA 96..502 17..423 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:47:08 Download gff for BS24950.complete
Subject Subject Range Query Range Percent Splice Strand
CG14391-RA 96..502 17..423 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:47:08 Download gff for BS24950.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12694341..12694747 17..423 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:03:40 Download gff for BS24950.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8520063..8520469 17..423 100   Minus

BS24950.pep Sequence

Translation from 16 to 423

> BS24950.pep
MEFAIPEAQYWDVSKKSQKDRQMIRKFVPEAVDLATISRAEIYRIDTFYL
ECQKYRDHYRDPYGKVHCPAFFHLHKGKCGIKLDQSVIKMTQAIAATVDR
QPIVFPLIPNKSMFLGGSIPMGSQTSQVGVTSYLR*

BS24950.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:37:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG14391-PA 135 CG14391-PA 1..135 1..135 713 100 Plus
CG31347-PA 143 CG31347-PA 4..132 3..132 262 38.5 Plus
CG13110-PA 133 CG13110-PA 3..112 5..116 229 42 Plus
CG43796-PA 127 CG43796-PA 4..109 13..119 212 40.2 Plus