BS24954.complete Sequence
827 bp assembled on 2011-06-28
GenBank Submission: KX805747
> BS24954.complete
GAAGTTATCAGTCGACATGTGCTTAAGGCTTTTACTATCTATACTAGTAT
CAATTGCTGGCCTGGCTTGTGCTGCTCGAATTCCTGGGCCAGAGGAACGG
ATTGTCGGAGGTTCATACATCCCCATCGAATATGTTCCTTGGCAAGTGTC
GGTGCAAAATAATTCGTTACATTGCTGTGGTGGAGTCATCTACAGTGATC
GAGCTATTTTGACTGCCGCTCATTGCCTTTCTAATGTAACTGTGACGGAT
CTATCAGTTCGCGCTGGATCTTCGTATTGGAGCAAAGGTGGTCAGGTGTT
AAAGGTGCTAAAGACAATTGCACATCCAAAATACGTGCCTAAACTTTACA
ATCCGTATGATATTGCTGTGCTAATTTTGGAGGCACCTCTCAGACTTGGT
GGCACTGTAAAGAAAATTCCTCTAGCCGAACAGACTCCCGTGGCTGGTAC
AATTGTTTTGACCTCCGGATGGGGATATACACGAGAGAACTCTTCATTCC
TTTGGCCAATACTGCAAGGCGTACATGTAGCCATTCTGAATAGAACGGAT
TGTCTGAAAGCTTACAAGCACGTTAATATAACTATCGACATGATCTGTGC
CGACGGACAAAGATGGGATACTTGTCAAGGTGATTCCGGTGGTCCTTTGA
TTGAAACAACGAAAGGCGGCCATAGGCAACTCATAGGCATGGTTAGCTGG
GGAGACGGTTGTGGTACAAATCCTGGCGTCTACGAAGATATTGCATTCTT
CCACAACTGGATCAAATATACAGTTAAAAAAAATATTTACAAAAGTATTG
TTAAAATATAAAAGCTTTCTAGACCAT
BS24954.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:02:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31681-RA | 795 | CG31681-PA | 1..795 | 17..811 | 3975 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:02:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31681-RA | 949 | CG31681-RA | 30..824 | 17..811 | 3975 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:02:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2286050..2286844 | 811..17 | 3975 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 16:02:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Tv1 | 6868 | Dvir\Tv1 6868bp Derived from AF056940 (Rel. 62, Last updated, Version 4). | 6238..6295 | 756..813 | 127 | 72.9 | Plus |
BS24954.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-28 12:15:57 Download gff for
BS24954.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31681-RA | 30..815 | 17..802 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:51:07 Download gff for
BS24954.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31681-RA | 30..815 | 17..802 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:10:01 Download gff for
BS24954.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31681-RA | 30..815 | 17..802 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:10:01 Download gff for
BS24954.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2286059..2286844 | 17..802 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:51:07 Download gff for
BS24954.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2286059..2286844 | 17..802 | 100 | | Minus |
BS24954.pep Sequence
Translation from 16 to 810
> BS24954.pep
MCLRLLLSILVSIAGLACAARIPGPEERIVGGSYIPIEYVPWQVSVQNNS
LHCCGGVIYSDRAILTAAHCLSNVTVTDLSVRAGSSYWSKGGQVLKVLKT
IAHPKYVPKLYNPYDIAVLILEAPLRLGGTVKKIPLAEQTPVAGTIVLTS
GWGYTRENSSFLWPILQGVHVAILNRTDCLKAYKHVNITIDMICADGQRW
DTCQGDSGGPLIETTKGGHRQLIGMVSWGDGCGTNPGVYEDIAFFHNWIK
YTVKKNIYKSIVKI*
BS24954.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:48:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31681-PA | 264 | CG31681-PA | 1..264 | 1..264 | 1411 | 100 | Plus |
| betaTry-PB | 253 | CG18211-PB | 1..249 | 6..249 | 454 | 42.6 | Plus |
| betaTry-PA | 253 | CG18211-PA | 1..249 | 6..249 | 454 | 42.6 | Plus |
| alphaTry-PA | 256 | CG18444-PA | 7..252 | 5..252 | 442 | 41.9 | Plus |
| gammaTry-PA | 253 | CG30028-PA | 7..249 | 5..249 | 435 | 40.8 | Plus |
