BS24957.complete Sequence
386 bp assembled on 2011-06-28
GenBank Submission: KX805618
> BS24957.complete
GAAGTTATCAGTCGACATGGAATACGGAAATGGTATGCAATACGATGGTT
ATAGCCAAGGTGGCGAGGGCTTTGAAATGCTGTACAACCAAACGAGCAGT
GGCCATGGATATAGCCAGCAGCAGAGTAATTGCGGACAAGGTTCTTCAAA
TTTTAATGGTGCATCTGCATCGCTTGGAGGTCCTGGCTATCGCAGTCCTT
TGCGATACACAAAAATGCTTCGTGAGATGAACTCTCGCAACGGGCTTTAC
TCTCCAATGGAACAGCAGCGGAGCAGTGGGCAAGGCGACTACTATAATAC
ATTGCCCGGCCTTGGCGGCCCAGAAGGTCAAGCTTATCAGTCGCGGGGCA
ATGGAAATCCATACTACTAAAAGCTTTCTAGACCAT
BS24957.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:59:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15219-RA | 354 | CG15219-PA | 1..354 | 17..370 | 1740 | 99.4 | Plus |
| CG15219-RC | 360 | CG15219-PC | 1..339 | 17..371 | 1470 | 94.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:59:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15219-RA | 521 | CG15219-RA | 111..466 | 16..371 | 1750 | 99.4 | Plus |
| CG15219-RC | 505 | CG15219-RC | 111..450 | 16..371 | 1475 | 94.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:59:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 22105116..22105299 | 249..66 | 890 | 98.9 | Minus |
| 2L | 23513712 | 2L | 22104946..22105067 | 371..250 | 610 | 100 | Minus |
| 2L | 23513712 | 2L | 22105350..22105402 | 68..16 | 265 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:59:13 has no hits.
BS24957.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-28 12:03:49 Download gff for
BS24957.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15219-RA | 106..457 | 17..368 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:49:23 Download gff for
BS24957.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15219-RA | 112..463 | 17..368 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:08:31 Download gff for
BS24957.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15219-RA | 112..463 | 17..368 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:08:31 Download gff for
BS24957.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 22104949..22105067 | 250..368 | 100 | <- | Minus |
| 2L | 22105116..22105297 | 68..249 | 98 | <- | Minus |
| 2L | 22105351..22105401 | 17..67 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:49:23 Download gff for
BS24957.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 22105351..22105401 | 17..67 | 100 | | Minus |
| arm_2L | 22104949..22105067 | 250..368 | 100 | <- | Minus |
| arm_2L | 22105116..22105297 | 68..249 | 98 | <- | Minus |
BS24957.pep Sequence
Translation from 16 to 369
> BS24957.pep
MEYGNGMQYDGYSQGGEGFEMLYNQTSSGHGYSQQQSNCGQGSSNFNGAS
ASLGGPGYRSPLRYTKMLREMNSRNGLYSPMEQQRSSGQGDYYNTLPGLG
GPEGQAYQSRGNGNPYY*
BS24957.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:47:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15219-PA | 117 | CG15219-PA | 1..117 | 1..117 | 642 | 100 | Plus |
| CG15219-PC | 119 | CG15219-PC | 1..79 | 1..79 | 428 | 100 | Plus |
