BS24984.complete Sequence
596 bp assembled on 2011-06-27
GenBank Submission: KX800572
> BS24984.complete
GAAGTTATCAGTCGACATGTCTGTTTCCAACAAGGCGGAACCCAAATCAC
CAGTTAAAAAGGTCAACATGGACACAACGACTGCAATCCCAGAGGGCACC
GCTTTATGCCGCTACTGCGGACGCCACTTCAACACGGATCGTCTGGCGAA
GCACGAGGAGGTGTGCCAGCGCATGCTGACCACCAAACGCAAGATATTCG
ATGCCTCCAAGCAGCGGATCGAGGGCACCGAGGCCGCGGCGTTCAATATG
AAGTCGAAGGGCAATCGCAACCGTTCAACTTACAGTAGTGCTGCCCAGCA
GAAGGGTCTGACCACTGGAGTGAAGAAGAACAACTGGCGTAAGAAGCACG
AGGACTTCATTCAGTCGATTAGAGCGGCCAAGCAGGTGAAGGCGCACTTG
GCGCGCGGCGGCAAGTTGAGCGACCTGCCACCACCGCCACCTTCGGAGAA
TCCAGACTATGTCCAGTGTCCCCACTGTGGTCGCCGATTCAACGAACAGG
CTGCGGAGCGTCATATCCCCAAGTGCGTTAACATGGTGCACAACAAGCCC
CGTAACGGTCCGCCGGCCAAGAGGCGTTGAAAGCTTTCTAGACCAT
BS24984.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:47:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42675-RD | 564 | CG42675-PD | 1..564 | 17..580 | 2820 | 100 | Plus |
CG42675-RG | 1284 | CG42675-PG | 738..1284 | 34..580 | 2735 | 100 | Plus |
CG42675-RF | 1152 | CG42675-PF | 606..1152 | 34..580 | 2735 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:47:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42675-RD | 644 | CG42675-RD | 19..582 | 17..580 | 2820 | 100 | Plus |
CG42675-RG | 1448 | CG42675-RG | 840..1386 | 34..580 | 2735 | 100 | Plus |
CG42675-RF | 1834 | CG42675-RF | 1226..1772 | 34..580 | 2735 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:47:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 5818248..5818758 | 70..580 | 2555 | 100 | Plus |
3R | 32079331 | 3R | 5818134..5818188 | 17..71 | 275 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:47:08 has no hits.
BS24984.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:24:15 Download gff for
BS24984.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42675-RD | 19..581 | 17..579 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:04:35 Download gff for
BS24984.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42675-RD | 19..581 | 17..579 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:49:05 Download gff for
BS24984.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42675-RD | 19..581 | 17..579 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:49:05 Download gff for
BS24984.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 5818134..5818187 | 17..70 | 100 | -> | Plus |
3R | 5818249..5818757 | 71..579 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:04:35 Download gff for
BS24984.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 1643856..1643909 | 17..70 | 100 | -> | Plus |
arm_3R | 1643971..1644479 | 71..579 | 100 | | Plus |
BS24984.pep Sequence
Translation from 16 to 579
> BS24984.pep
MSVSNKAEPKSPVKKVNMDTTTAIPEGTALCRYCGRHFNTDRLAKHEEVC
QRMLTTKRKIFDASKQRIEGTEAAAFNMKSKGNRNRSTYSSAAQQKGLTT
GVKKNNWRKKHEDFIQSIRAAKQVKAHLARGGKLSDLPPPPPSENPDYVQ
CPHCGRRFNEQAAERHIPKCVNMVHNKPRNGPPAKRR*
BS24984.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:38:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42675-PD | 187 | CG10999-PC | 1..187 | 1..187 | 1004 | 100 | Plus |
CG42675-PF | 383 | CG42675-PF | 202..383 | 6..187 | 978 | 99.5 | Plus |
CG42675-PC | 383 | CG10999-PB | 202..383 | 6..187 | 978 | 99.5 | Plus |
CG42675-PB | 383 | CG10999-PA | 202..383 | 6..187 | 978 | 99.5 | Plus |
CG42675-PE | 412 | CG42675-PE | 231..412 | 6..187 | 978 | 99.5 | Plus |