BS24991.complete Sequence
908 bp assembled on 2011-06-28
GenBank Submission: KX805751
> BS24991.complete
GAAGTTATCAGTCGACATGAGATCCCTGGCCAACCAGGAGGATGGCGCCA
TAAAGGACGAGCCGCCGAGCGACGACGAGCCCGCACAGCCCGCCAGAGAT
CGCGTCCCGCCAATTTCCCGCGGAGCAGCGCCCGCTAGCTCATCCTCCGT
ATCCGCGGGCCTGGGCGCAGGCGAGACTGACTTCAAGGAGCGCTACAAGA
ACCTCAAGAAGAAGCTGAAGTTCCTCATCTATGAGAACGAGTACTTCCAG
GATCTATTGCACACCAACCAGCGGCGTCTGCTGAAAGTTTCCCGGGATCG
TACCTTCCTGCTGGACCGTCTGCTGGTGTACGAGAAGCCGGCCAAGGACT
CTAGCGACTCGGATGCCACCGACAGCTCCGATTCGGAGCCAGCTTCTACG
TCCGGCGTTGCCGGCGGATCGCAAACATCCAAGGACGCCATTCGGCGCAA
GCACAAAGACAAGGGGGCACCAGGAATTCCAGGTGTGCCTCCGCACATGC
CCACAGTGGGCGCCCCACGAGGTCGAAGACGAAAAATCCTAACCGGAATG
TTGCCCGCGAACCATGGAATCCCAGCAATTGCTGCGAAAAAACAACTTAC
CGCCACGGTGTCACCTTCGCAGCAGCCACCGCAACTACAGACTGCACCGA
AGGATGTGTCGCCCGGCCTCAGCCAAGCGGAGATTGCCCGCCAGCTGCAG
GAGCGACGACCGACGCCGTTGGAGCTATTGAGTCCGGAATGCACTTCGGC
CACCGTGCCCACAACGATGCTCAGCGATGAAAGCCCCTCTAAGTGTTATC
CCAATGAAAGCCTGCAGCATCTGATGGAGGACGACTCTCACTCGCACGAG
GTGGCCGCCGAGGAGTGCGTGCCCATGGAGTACACAAGTTAAAAGCTTTC
TAGACCAT
BS24991.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:21:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18004-RB | 876 | CG18004-PB | 1..876 | 17..892 | 4365 | 99.9 | Plus |
CG18004-RA | 894 | CG18004-PA | 22..894 | 20..892 | 4350 | 99.9 | Plus |
CG18004-RD | 876 | CG18004-PD | 22..876 | 20..892 | 4045 | 97.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:21:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18004-RB | 1168 | CG18004-RB | 225..1100 | 17..892 | 4365 | 99.9 | Plus |
CG18004-RA | 1044 | CG18004-RA | 104..976 | 20..892 | 4350 | 99.9 | Plus |
CG18004-RD | 1026 | CG18004-RD | 104..958 | 20..892 | 4045 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:21:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10885590..10886152 | 233..795 | 2800 | 99.8 | Plus |
2R | 25286936 | 2R | 10885320..10885533 | 20..233 | 1070 | 100 | Plus |
2R | 25286936 | 2R | 10886210..10886307 | 795..892 | 490 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:21:51 has no hits.
BS24991.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-28 12:21:02 Download gff for
BS24991.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18004-RB | 225..1098 | 17..890 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:58:59 Download gff for
BS24991.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18004-RB | 225..1098 | 17..890 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:17:18 Download gff for
BS24991.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18004-RB | 225..1098 | 17..890 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:17:18 Download gff for
BS24991.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10885315..10885532 | 17..232 | 99 | -> | Plus |
2R | 10885590..10886152 | 233..795 | 99 | -> | Plus |
2R | 10886211..10886305 | 796..890 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:58:59 Download gff for
BS24991.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6772820..6773037 | 17..232 | 99 | -> | Plus |
arm_2R | 6773095..6773657 | 233..795 | 99 | -> | Plus |
arm_2R | 6773716..6773810 | 796..890 | 100 | | Plus |
BS24991.pep Sequence
Translation from 16 to 891
> BS24991.pep
MRSLANQEDGAIKDEPPSDDEPAQPARDRVPPISRGAAPASSSSVSAGLG
AGETDFKERYKNLKKKLKFLIYENEYFQDLLHTNQRRLLKVSRDRTFLLD
RLLVYEKPAKDSSDSDATDSSDSEPASTSGVAGGSQTSKDAIRRKHKDKG
APGIPGVPPHMPTVGAPRGRRRKILTGMLPANHGIPAIAAKKQLTATVSP
SQQPPQLQTAPKDVSPGLSQAEIARQLQERRPTPLELLSPECTSATVPTT
MLSDESPSKCYPNESLQHLMEDDSHSHEVAAEECVPMEYTS*
BS24991.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:52:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18004-PB | 291 | CG18004-PB | 1..291 | 1..291 | 1499 | 100 | Plus |
CG18004-PA | 297 | CG18004-PA | 8..297 | 2..291 | 1494 | 100 | Plus |
CG18004-PD | 291 | CG18004-PD | 8..291 | 2..291 | 1443 | 97.9 | Plus |