BS25002.complete Sequence
1052 bp assembled on 2011-06-27
GenBank Submission: KX804350
> BS25002.complete
GAAGTTATCAGTCGACATGTGCAACTACGACTGCTGCAAGTCCAGGTCGC
CGATTGCCAAGCGAATGGCGGCCAGGAAGCTTCTGCAGATGGAGGAGGAG
GAACGCCGGAAGCCCAAGCTGGTCATCCCGACGCCCCAGAGCCTCTTCTA
CCCCTTCGAGGAAGTCGAGGCCATGGCCAAGTACATCGTGAACGTTAGCC
ACATCAGGCCAAAGTACGGACTAATCTGCGGCAGCTTCCTGAGCGATATG
GTCAGCTTGGTGGAGCAGCCGGTGGTCATTCCCTACGAGGACATACCCAA
CTTCCCCGACGGCATAGAGCCGGACTGCAGCTTCGTCTTGGGCACAGTCA
TGGGAGCACCCATAATAGCGCTGGTCCACAGTTTCCACTCCTGCGACGGC
TACAACCTGGCCACCTGTGCGCTGCCCGTCCGCGTGATGCAGTTGTGCGG
GGTCAGGACCATCATGCTGACCTCTGAAGCAGCGGCCGTAGATCACGGAT
TCGCCCTGGGCGACATAATGCTTGTCCAGGACCACATCAATGTGGTGGGC
ATGATGCACCAGACGCCGCTAGAGGGTCCCAGTGATCCGCGCTTTGGCAG
CCGCCGATTCTCGATGGTGAACGCATATGACAAGGACCTGCTGGAGAAGG
CACTCGAGATTGGCAAGCGAATGGGCATCCAGAAGTTCCTGCACAGCGGC
GTCTTAGCCTGCATGGGAGGTCCCATTCTCGGCACTGTGGCCGAGGAGCG
AATGCTGCGGACAATGGAGGTCAGTGCCGTGGGCATGTCCCTGGTGCCCG
AGGTTATAGCCGCCCACCACGGCGGCCTGAAGGTGCTCGCCTTTGTGGTT
ATCAGCAGGGCGGCCAGCGACAAGGAGAGCGAGGAGAGCGATAAGGACAA
GGAGAAGGACACTGACAGGGACTCCAAGCAGGATAAGCGAGAGCAGGATT
CCCAGGAGCCTGTCCCCCTCCCAAGACTGCAGGCCTGCTCCGATCTGATC
GGCCGACTTATGTACTGCATGCACCTCGAGATCTGAAAGCTTTCTAGACC
AT
BS25002.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:50:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18128-RA | 1020 | CG18128-PA | 1..1020 | 17..1036 | 5070 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:50:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18128-RA | 1139 | CG18128-RA | 92..1111 | 17..1036 | 5070 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:50:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23718826..23719845 | 1036..17 | 5070 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:50:41 has no hits.
BS25002.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:24:19 Download gff for
BS25002.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18128-RA | 92..1110 | 17..1035 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:05:07 Download gff for
BS25002.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18128-RA | 92..1110 | 17..1035 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:50:17 Download gff for
BS25002.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18128-RA | 92..1110 | 17..1035 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:50:17 Download gff for
BS25002.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23718827..23719845 | 17..1035 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:05:07 Download gff for
BS25002.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19606350..19607368 | 17..1035 | 99 | | Minus |
BS25002.pep Sequence
Translation from 16 to 1035
> BS25002.pep
MCNYDCCKSRSPIAKRMAARKLLQMEEEERRKPKLVIPTPQSLFYPFEEV
EAMAKYIVNVSHIRPKYGLICGSFLSDMVSLVEQPVVIPYEDIPNFPDGI
EPDCSFVLGTVMGAPIIALVHSFHSCDGYNLATCALPVRVMQLCGVRTIM
LTSEAAAVDHGFALGDIMLVQDHINVVGMMHQTPLEGPSDPRFGSRRFSM
VNAYDKDLLEKALEIGKRMGIQKFLHSGVLACMGGPILGTVAEERMLRTM
EVSAVGMSLVPEVIAAHHGGLKVLAFVVISRAASDKESEESDKDKEKDTD
RDSKQDKREQDSQEPVPLPRLQACSDLIGRLMYCMHLEI*
BS25002.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:38:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18128-PA | 339 | CG18128-PA | 1..339 | 1..339 | 1759 | 100 | Plus |
CG16758-PF | 328 | CG16758-PF | 1..325 | 1..337 | 672 | 41.6 | Plus |
CG16758-PG | 372 | CG16758-PG | 45..369 | 1..337 | 672 | 41.6 | Plus |
CG16758-PE | 321 | CG16758-PE | 1..318 | 1..337 | 671 | 41.6 | Plus |
CG16758-PH | 396 | CG16758-PH | 45..393 | 1..337 | 637 | 38.9 | Plus |