BS25010.complete Sequence
587 bp assembled on 2011-06-27
GenBank Submission: KX805090
> BS25010.complete
GAAGTTATCAGTCGACATGCGGAAGGTCCAAGTTTTGGTTCAGACGCGCG
ACGGCAAGAAGACCGTCTACGAGGTGGATCGCTTAGGAACGGTGGCCAGC
CTGAAGGCACGGATCGGGCAGGTCATGTCCGTGCCCATGGGCTTCAGTCG
GCTGTCGTACAAGGGTCGCGTGCTATCCAATCAGAGCGTACTGGAGGATT
TGGGGCCCAATAAGTCCACCCTGGATCTCACCTGGAAGCCGGTCGTCCTG
ACGGCCAATCAGAGCAGCAAGTTAAGCAAGTTCGGCTATGGCAGGATAGA
CGATAGTGAAGTTATGTTTACACTGATCGGTGGCTATCAGCAACGCGAAG
AATATCCTGGTGGCCTAGTCAATCCACCGGACGACGAAAGTCAACTAAAC
TTCAACGCAGGTGACGATGATGATGCACTGGAGGCCCAGGACATGACTGG
ACACGATTTGTCCTCAATTCAAACCGATGATTTATCGCTCAAAGGCCAGA
CGGAACCGGAGCTGGATTGCTCCATTGGATCTCATGGATTCTCTGGATCT
CAAGAAGAAGGCCACGAATAAAAGCTTTCTAGACCAT
BS25010.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:48:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32713-RB | 555 | CG32713-PB | 1..555 | 17..571 | 2760 | 99.8 | Plus |
| CG32713-RA | 555 | CG32713-PA | 1..555 | 17..571 | 2760 | 99.8 | Plus |
| CG33223-RB | 555 | CG33223-PB | 1..555 | 17..571 | 2625 | 98.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:48:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32713-RB | 796 | CG32713-RB | 73..627 | 17..571 | 2760 | 99.8 | Plus |
| CG32713-RA | 704 | CG32713-RA | 73..627 | 17..571 | 2760 | 99.8 | Plus |
| CG33223-RB | 689 | CG33223-RB | 67..621 | 17..571 | 2625 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:48:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8457006..8457560 | 571..17 | 2760 | 99.8 | Minus |
| X | 23542271 | X | 8465758..8466312 | 571..17 | 2625 | 98.2 | Minus |
| X | 23542271 | X | 13402476..13402714 | 258..17 | 785 | 89.3 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:48:47 has no hits.
BS25010.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:24:17 Download gff for
BS25010.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32713-RA | 73..625 | 17..569 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:04:51 Download gff for
BS25010.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32713-RA | 73..625 | 17..569 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:49:39 Download gff for
BS25010.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32713-RA | 73..625 | 17..569 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:49:39 Download gff for
BS25010.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8457008..8457560 | 17..569 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:04:51 Download gff for
BS25010.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8351041..8351593 | 17..569 | 99 | | Minus |
BS25010.pep Sequence
Translation from 16 to 570
> BS25010.pep
MRKVQVLVQTRDGKKTVYEVDRLGTVASLKARIGQVMSVPMGFSRLSYKG
RVLSNQSVLEDLGPNKSTLDLTWKPVVLTANQSSKLSKFGYGRIDDSEVM
FTLIGGYQQREEYPGGLVNPPDDESQLNFNAGDDDDALEAQDMTGHDLSS
IQTDDLSLKGQTEPELDCSIGSHGFSGSQEEGHE*
BS25010.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:38:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32713-PB | 184 | CG32713-PB | 1..184 | 1..184 | 947 | 100 | Plus |
| CG32713-PA | 184 | CG32713-PA | 1..184 | 1..184 | 947 | 100 | Plus |
| CG33223-PB | 184 | CG33223-PB | 1..184 | 1..184 | 923 | 97.3 | Plus |
| CG33223-PA | 184 | CG33223-PA | 1..184 | 1..184 | 923 | 97.3 | Plus |
| CG12725-PA | 163 | CG12725-PA | 1..162 | 1..178 | 461 | 60.3 | Plus |
