Clone BS25011 Report

Search the DGRC for BS25011

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:250
Well:11
Vector:pDNR-Dual
Associated Gene/TranscriptCG10063-RA
Protein status:BS25011.pep: full length peptide match
Sequenced Size:671

Clone Sequence Records

BS25011.complete Sequence

671 bp assembled on 2011-06-27

GenBank Submission: KX806463

> BS25011.complete
GAAGTTATCAGTCGACATGATTCGCGCCATGGTAATGACCAAATGGAGTA
AGTCGGTGGCGGGACCACTGGTCACGGCGTGGAACTACTCCACATTGAAT
CGGCTCAATGGCAATACTGTGCGCCCGCGTGCTCTGTTCCTGAATCTCGA
CCGCAAGTTCTCCGCCGAAGGTGGCGGCGATGAGAAGCCCAAGAATGTGC
CTCCCGGCTTTGCGGCTCCAGGGTTTCCATCCACCTTGGGCAATAACCCA
GAGAACACTACGCGTAAGGATGTGCCCATTGGCGAGGTGCAGGCGCCAAC
TATTTCCGTAGTGAACGCAGGTGGTAAACTGGGCAGAGCCGAGCCACTGG
AGGCCAGCACCATCGTGCGCAGCAAGGGCACTTCGAACGAGGACAAGATG
ACCGAGGCGCAGAAGAAGGCATCGGAGGCCAAGGAGGCGGCCGCCAAGCA
GTTGCAGGATGTCATGGCCAACTTGCCCAGCAAGGAGCAGACCGAAAAGT
ATTTCTTTCGCGTGGTTGCCTTCTTCTATGACTTGACCTACCTAACCGCC
ACCTGGTTGCTCAACTTTGTCGAGCACAATATCGTTCAAAATGCCAAGGT
GCAGCACTACTGGAAGCGATTCCACGAAAAAATGGAGCAGGCCAAGAAGG
ATTAAAAGCTTTCTAGACCAT

BS25011.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:49:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG10063-RA 639 CG10063-PA 1..639 17..655 3045 98.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:49:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG10063-RA 827 CG10063-RA 110..748 17..655 3045 98.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:49:26
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6971658..6972229 655..84 2725 98.4 Minus
3L 28110227 3L 6972292..6972358 83..17 320 98.5 Minus
Blast to na_te.dros performed on 2014-11-26 15:49:28 has no hits.

BS25011.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:24:18 Download gff for BS25011.complete
Subject Subject Range Query Range Percent Splice Strand
CG10063-RA 64..700 17..653 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:04:57 Download gff for BS25011.complete
Subject Subject Range Query Range Percent Splice Strand
CG10063-RA 110..746 17..653 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:49:54 Download gff for BS25011.complete
Subject Subject Range Query Range Percent Splice Strand
CG10063-RA 110..746 17..653 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:49:54 Download gff for BS25011.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6971660..6972229 84..653 98 <- Minus
3L 6972292..6972358 17..83 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:04:57 Download gff for BS25011.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6964760..6965329 84..653 98 <- Minus
arm_3L 6965392..6965458 17..83 98   Minus

BS25011.pep Sequence

Translation from 16 to 654

> BS25011.pep
MIRAMVMTKWSKSVAGPLVTAWNYSTLNRLNGNTVRPRALFLNLDRKFSA
EGGGDEKPKNVPPGFAAPGFPSTLGNNPENTTRKDVPIGEVQAPTISVVN
AGGKLGRAEPLEASTIVRSKGTSNEDKMTEAQKKASEAKEAAAKQLQDVM
ANLPSKEQTEKYFFRVVAFFYDLTYLTATWLLNFVEHNIVQNAKVQHYWK
RFHEKMEQAKKD*

BS25011.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:38:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG10063-PA 212 CG10063-PA 1..212 1..212 1103 100 Plus