BS25011.complete Sequence
671 bp assembled on 2011-06-27
GenBank Submission: KX806463
> BS25011.complete
GAAGTTATCAGTCGACATGATTCGCGCCATGGTAATGACCAAATGGAGTA
AGTCGGTGGCGGGACCACTGGTCACGGCGTGGAACTACTCCACATTGAAT
CGGCTCAATGGCAATACTGTGCGCCCGCGTGCTCTGTTCCTGAATCTCGA
CCGCAAGTTCTCCGCCGAAGGTGGCGGCGATGAGAAGCCCAAGAATGTGC
CTCCCGGCTTTGCGGCTCCAGGGTTTCCATCCACCTTGGGCAATAACCCA
GAGAACACTACGCGTAAGGATGTGCCCATTGGCGAGGTGCAGGCGCCAAC
TATTTCCGTAGTGAACGCAGGTGGTAAACTGGGCAGAGCCGAGCCACTGG
AGGCCAGCACCATCGTGCGCAGCAAGGGCACTTCGAACGAGGACAAGATG
ACCGAGGCGCAGAAGAAGGCATCGGAGGCCAAGGAGGCGGCCGCCAAGCA
GTTGCAGGATGTCATGGCCAACTTGCCCAGCAAGGAGCAGACCGAAAAGT
ATTTCTTTCGCGTGGTTGCCTTCTTCTATGACTTGACCTACCTAACCGCC
ACCTGGTTGCTCAACTTTGTCGAGCACAATATCGTTCAAAATGCCAAGGT
GCAGCACTACTGGAAGCGATTCCACGAAAAAATGGAGCAGGCCAAGAAGG
ATTAAAAGCTTTCTAGACCAT
BS25011.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:49:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10063-RA | 639 | CG10063-PA | 1..639 | 17..655 | 3045 | 98.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:49:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10063-RA | 827 | CG10063-RA | 110..748 | 17..655 | 3045 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:49:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 6971658..6972229 | 655..84 | 2725 | 98.4 | Minus |
3L | 28110227 | 3L | 6972292..6972358 | 83..17 | 320 | 98.5 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:49:28 has no hits.
BS25011.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:24:18 Download gff for
BS25011.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10063-RA | 64..700 | 17..653 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:04:57 Download gff for
BS25011.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10063-RA | 110..746 | 17..653 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:49:54 Download gff for
BS25011.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10063-RA | 110..746 | 17..653 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:49:54 Download gff for
BS25011.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6971660..6972229 | 84..653 | 98 | <- | Minus |
3L | 6972292..6972358 | 17..83 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:04:57 Download gff for
BS25011.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 6964760..6965329 | 84..653 | 98 | <- | Minus |
arm_3L | 6965392..6965458 | 17..83 | 98 | | Minus |
BS25011.pep Sequence
Translation from 16 to 654
> BS25011.pep
MIRAMVMTKWSKSVAGPLVTAWNYSTLNRLNGNTVRPRALFLNLDRKFSA
EGGGDEKPKNVPPGFAAPGFPSTLGNNPENTTRKDVPIGEVQAPTISVVN
AGGKLGRAEPLEASTIVRSKGTSNEDKMTEAQKKASEAKEAAAKQLQDVM
ANLPSKEQTEKYFFRVVAFFYDLTYLTATWLLNFVEHNIVQNAKVQHYWK
RFHEKMEQAKKD*
BS25011.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:38:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10063-PA | 212 | CG10063-PA | 1..212 | 1..212 | 1103 | 100 | Plus |