BS25021.complete Sequence
938 bp assembled on 2011-06-27
GenBank Submission: KX804326
> BS25021.complete
GAAGTTATCAGTCGACATGGATAATCATATGGATAAGAACGATGAGGACA
AGAGGTCGTCATCCCCGGATTCTCAACGTCAAGTTATAATATATATGCCA
CCCGCCGTTGAACATGGTCATGTTGTGTATCTAAAAGATGCGAATTTAGG
CGCCACAGAGACGGAGGCTTCTGCACAACTCGACCCACAGGAGCATCTTT
CGAATGCGGATCGGTTGGAGAACAATCGGGTGATTTCAGAGCTGGATGAT
GAGCCGAGCACGAGTGCTCAGTCCGCAGTTAAGGGTCAGAAATCAGAAGA
TGATCAGGGTCACCAGACCAAGACAGGTATTTCAAAAATGCCAGGATCTC
CTAAGCAGTTGCACAATGTATTGGAAGTAATCTGTCGCTTCTCACGCGAG
ATTCCTGATGCAATGGAGGGCCGGGAGCAACTCCAGCCGGCAGTGATTGT
CCAAATTCCAAAATATCGCGAACTGGGAACCCAGACCGCTGAGTTGCCAT
CGCAGTCGCAGCGATTGCGTTTGGATCTGACCGACCTGAGACCAGATCCG
AATCCACCGCCCTGCGAACGCACGCTGCACACATTCACGATTAGTGGCAA
CAATCTGCCGGGCAATCCTCGCCAGCTTCGTCAAACGATCTGCGCGCGAA
TTGGACGCTCCATCTGTGATTTTGTGGCAGCCTTTTGTCTTTGTCTGCAA
GTGAACAAGGATTGTGTCTTCTGTCTGGGTTTTTTTGTGGCCTTTGTGAT
CAGTGCCAGCTTCCTGACTGCCTTCTTCTACCGCACTCTTACCTTCTCCT
CGTCGCCGGTGCGAGTGGTGGCCAATCCGGTGAGCGGCACCATGCGCTAT
GAACTTGCCACACTGCGATTCAACGGAGGGTACTACTACATCTATAATAG
CAGCCAACAAAAGCTTCTCTAAAAGCTTTCTAGACCAT
BS25021.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:53:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16853-RB | 906 | CG16853-PB | 1..906 | 17..922 | 4530 | 100 | Plus |
| CG16853-RA | 906 | CG16853-PA | 1..906 | 17..922 | 4530 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:53:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16853-RB | 1053 | CG16853-RB | 72..977 | 17..922 | 4530 | 100 | Plus |
| CG16853-RA | 1293 | CG16853-RA | 385..1290 | 17..922 | 4530 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:52:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13542652..13543557 | 17..922 | 4530 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:52:59 has no hits.
BS25021.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:24:22 Download gff for
BS25021.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16853-RA | 385..1288 | 17..920 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:05:36 Download gff for
BS25021.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16853-RA | 385..1288 | 17..920 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:50:59 Download gff for
BS25021.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16853-RA | 385..1288 | 17..920 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:50:59 Download gff for
BS25021.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13542652..13543555 | 17..920 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:05:36 Download gff for
BS25021.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13542652..13543555 | 17..920 | 100 | | Plus |
BS25021.pep Sequence
Translation from 16 to 921
> BS25021.pep
MDNHMDKNDEDKRSSSPDSQRQVIIYMPPAVEHGHVVYLKDANLGATETE
ASAQLDPQEHLSNADRLENNRVISELDDEPSTSAQSAVKGQKSEDDQGHQ
TKTGISKMPGSPKQLHNVLEVICRFSREIPDAMEGREQLQPAVIVQIPKY
RELGTQTAELPSQSQRLRLDLTDLRPDPNPPPCERTLHTFTISGNNLPGN
PRQLRQTICARIGRSICDFVAAFCLCLQVNKDCVFCLGFFVAFVISASFL
TAFFYRTLTFSSSPVRVVANPVSGTMRYELATLRFNGGYYYIYNSSQQKL
L*
BS25021.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:39:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16853-PB | 301 | CG16853-PB | 1..301 | 1..301 | 1572 | 100 | Plus |
| CG16853-PA | 301 | CG16853-PA | 1..301 | 1..301 | 1572 | 100 | Plus |
