BS25036.complete Sequence
971 bp assembled on 2011-06-27
GenBank Submission: KX805974
> BS25036.complete
GAAGTTATCAGTCGACATGAGTTTTGATGCCGATTGTGATGAGTTTATTA
AAAACAAACTATTCCGTAGTAAAGGGAAATGTGATATATATGCCCGGCAA
TCGGATGTCTGCGTCGCGGTGAAGCAAAAGTCCACATTCCGAGCCACTGC
ACCCACTTTGCCTATGGCGGAGGGCAACAACAACAATGTGATTAGCATGC
GGTATGACATTTGGTTCCACATATCCATGCACATTGATCCGGAGGACGTA
CAGACCTTCGCTCTAATATGTAAACAAACCTCCAGACTGGTGGCTTCTCG
CGCCTTTTGGCGCAATCTTTACCGGCGTCACTGCACCGGAGCCACCTCTG
GTTGGAATCTGAATCTGCCCGCCGAGCTGCAGCTGGAGTCGATACGCAAT
TGTAAGACCCGGGCGCTTAAATCCCTTGTCATCGCGGCGCTCTTTCACTG
CCACCGACCGCTGAAGGTTCGCCTGGAGCTAGGCTATAACCTGGACTGGA
TGTTGCAGCGCATCTTTGTTTCCTGTTTTCAGACGCATTACCAGTGTCTA
TGGATCATGTGCTACAAGTTTTGGAACCGACAGTCCCATGAGCAGGACGA
AACGGAGACGCACACCGGCGAAGTCGTAAATGACTGGGAATCCCTGGCGG
ATGATGATGCGACAAAGCTAGCTCCAACTTTTTGTAATCCCCACGAGGGT
GTGGTTCTGCTTGTTGTTATCTGCCGCCACTTCGTGCCAACTTCCAACCA
TCTAGCCTATGGCCCTCAGCAGCAACGTTACCGTCTGCGAGCCACCCGGG
AACTCCTCTGCACGGATATGCGGGCCAAGAACCTAGAGCTGGACTTCGCC
GAGGATGGCTGCCGAAATGTGTCGGTAACCGTTAAGCACGATCGCATCGA
AAAGTACAAAGTATTGCCCTGGTGGCATCCGGACTTCCAGAGATTCGTTA
AATAAAAGCTTTCTAGACCAT
BS25036.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:53:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fsd-RA | 939 | CG12765-PA | 1..939 | 17..955 | 4680 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:53:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fsd-RA | 1020 | CG12765-RA | 68..1008 | 17..957 | 4690 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:53:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 13230777..13231651 | 83..957 | 4360 | 99.9 | Plus |
| 2R | 25286936 | 2R | 13230650..13230716 | 17..83 | 335 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:53:19 has no hits.
BS25036.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:24:22 Download gff for
BS25036.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12765-RA | 68..1004 | 17..953 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:05:39 Download gff for
BS25036.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fsd-RA | 68..1004 | 17..953 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:51:06 Download gff for
BS25036.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fsd-RA | 68..1004 | 17..953 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:51:06 Download gff for
BS25036.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 13230650..13230716 | 17..83 | 100 | -> | Plus |
| 2R | 13230778..13231647 | 84..953 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:05:39 Download gff for
BS25036.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 9118155..9118221 | 17..83 | 100 | -> | Plus |
| arm_2R | 9118283..9119152 | 84..953 | 99 | | Plus |
BS25036.pep Sequence
Translation from 16 to 954
> BS25036.pep
MSFDADCDEFIKNKLFRSKGKCDIYARQSDVCVAVKQKSTFRATAPTLPM
AEGNNNNVISMRYDIWFHISMHIDPEDVQTFALICKQTSRLVASRAFWRN
LYRRHCTGATSGWNLNLPAELQLESIRNCKTRALKSLVIAALFHCHRPLK
VRLELGYNLDWMLQRIFVSCFQTHYQCLWIMCYKFWNRQSHEQDETETHT
GEVVNDWESLADDDATKLAPTFCNPHEGVVLLVVICRHFVPTSNHLAYGP
QQQRYRLRATRELLCTDMRAKNLELDFAEDGCRNVSVTVKHDRIEKYKVL
PWWHPDFQRFVK*
BS25036.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:39:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fsd-PA | 312 | CG12765-PA | 1..312 | 1..312 | 1709 | 100 | Plus |
