BS25055.complete Sequence
1010 bp assembled on 2011-06-29
GenBank Submission: KX802696
> BS25055.complete
GAAGTTATCAGTCGACATGTCCGCTCCGGTCCGCGGACTGGACGAGAGCA
GCAAGGGCGTCATAGCCGCCAGCAAGCGCAGCCAGCAGAAATTGCGTCGA
CGCAAGATCTTCACGAGAACGCCCTCGTCCTCCGTACCGCTCGATGTCAT
CGGGGACAACTCTACGTCCTCGTCCTCCGTCGCCGGAAACGCATCCAAGA
AGGCTTTGAATCGGGCACGCAGCGTCGTTGCACCCGATGTGATTACCCTG
GTGTCCCTGTTGAGTTCCGAGGGCAGCGACTCCGAGCGGGAGGATAACAG
TTCAGTGGCGGTATCATCGCCGCCAACTGGCGGGTCGGATAAACAAACAT
CGGGCGCCTCGCAGCGAAGGGCGCCTTTGTTGAGGAAGACGGGCAAATCG
GTCTCGTTTCAAGACAGCTATCCGCCCACCTTCCAACTGGCCTCCAAGGA
GTACTCGCACATGATACGCCGCGGTTCGATAGCACCTCTGGCAGCCCGAA
TCCGAGCCAATCGACCGCCCACAGCGCCGCCAGTTTCCATTTTCCTAACC
GACGTCCAGGCCAAAATGGACCAGCAGCCGAAGAAGGAGGGTGGAGCTGA
CCCACCCGTTGTCACCTTATCGCCGGACGAGGCCAAGAAGGAGAACAATA
ACAACGCGGCCAATTGCGAGGACCAACAACCGCAGCCGGATCACAACTAT
CCGGCGTATGTGCGCAGTCTGAAGGAACGCGAGTGCTGGAAGTTGCACCA
GAAGATGGGAGCCAAGGGCGTCAGTGTGAGCTATGAAACGGTGTTGAGGG
GTATGCTCACGCCCACCGAGTTCCGGCACTTTCAAAAGCAGCGGGAGCAG
GAGGAGGCCCGAGTTCTCGAGGAGGCGGAGGCCGCCGAAGCGGCTGCTGC
AGCCGCAATCCTTGAGAGCGGCGAAAAGGATGGTCGCAAGCCTCCAGTCA
CGGCCATCGAACGCCTCTCGGAAGCTCTGCTCCAGAGCAAGTAGAAGCTT
TCTAGACCAT
BS25055.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:40:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13203-RD | 978 | CG13203-PD | 1..978 | 17..994 | 4875 | 99.9 | Plus |
| CG13203-RC | 1626 | CG13203-PC | 649..1626 | 17..994 | 4875 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:40:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13203-RD | 1617 | CG13203-RD | 352..1329 | 17..994 | 4875 | 99.9 | Plus |
| CG13203-RC | 2286 | CG13203-RC | 1021..1998 | 17..994 | 4875 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:40:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11376228..11376821 | 401..994 | 2955 | 99.8 | Plus |
| 2R | 25286936 | 2R | 11375534..11375918 | 17..401 | 1925 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:40:38 has no hits.
BS25055.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-29 15:52:18 Download gff for
BS25055.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13203-RD | 352..1329 | 17..994 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:06:54 Download gff for
BS25055.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13203-RC | 1021..1998 | 17..994 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:24:48 Download gff for
BS25055.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13203-RC | 1021..1998 | 17..994 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:24:48 Download gff for
BS25055.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11375534..11375918 | 17..401 | 100 | -> | Plus |
| 2R | 11376229..11376821 | 402..994 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:06:54 Download gff for
BS25055.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7263039..7263423 | 17..401 | 100 | -> | Plus |
| arm_2R | 7263734..7264326 | 402..994 | 99 | | Plus |
BS25055.pep Sequence
Translation from 16 to 993
> BS25055.pep
MSAPVRGLDESSKGVIAASKRSQQKLRRRKIFTRTPSSSVPLDVIGDNST
SSSSVAGNASKKALNRARSVVAPDVITLVSLLSSEGSDSEREDNSSVAVS
SPPTGGSDKQTSGASQRRAPLLRKTGKSVSFQDSYPPTFQLASKEYSHMI
RRGSIAPLAARIRANRPPTAPPVSIFLTDVQAKMDQQPKKEGGADPPVVT
LSPDEAKKENNNNAANCEDQQPQPDHNYPAYVRSLKERECWKLHQKMGAK
GVSVSYETVLRGMLTPTEFRHFQKQREQEEARVLEEAEAAEAAAAAAILE
SGEKDGRKPPVTAIERLSEALLQSK*
BS25055.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:55:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13203-PD | 325 | CG13203-PD | 1..325 | 1..325 | 1627 | 100 | Plus |
| CG13203-PC | 541 | CG13203-PC | 217..541 | 1..325 | 1627 | 100 | Plus |
