Clone BS25080 Report

Search the DGRC for BS25080

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:250
Well:80
Vector:pDNR-Dual
Associated Gene/TranscriptCG2209-RA
Protein status:BS25080.pep: gold
Sequenced Size:494

Clone Sequence Records

BS25080.complete Sequence

494 bp assembled on 2011-06-27

GenBank Submission: KX803783

> BS25080.complete
GAAGTTATCAGTCGACATGCCAGTTTTGAAACTTAATGCTTATTTCACCA
AATTCTTCCCATCCTCGATGGTGCGTTCCAAGGAGTTGGTGCGAAGAAGG
TATTCGATGAAGGTCGCGCAGGTGCGAAGATCTTACAACATAAAGTTCAA
TGAAGATCCAGAATTCGAATGCGATGCCACAGTCACGAATATGCCCCAAT
CCTTGAAGACTATGATTAAGAGGAAACTGCTCTCAAAGCGTGTGATCGGT
AGCTTTCGACTAAGATTCCATAGCAATTCGTTTAAGAAAAGGCTCGAGAT
CACAGCCACAATAACCAACCCAACAGTTCCGTCGGACACAGATCTCGCTC
CGGAGGATGAGCAGCTGTACGAGCTGTACATATGCAGTAGCCAGGGTCAA
TTGCTGGGCAAGATTCCCTTCCTGGAGAGCGACTACCGGCGTGCAGCTCG
CGAGGCCATCGATTTCCTGGCCTTCTAGAAGCTTTCTAGACCAT

BS25080.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:56:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG2209-RA 462 CG2209-PA 1..462 17..478 2310 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:56:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG2209-RA 752 CG2209-RA 61..522 17..478 2310 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:56:40
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13022258..13022719 17..478 2310 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:56:40 has no hits.

BS25080.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:24:29 Download gff for BS25080.complete
Subject Subject Range Query Range Percent Splice Strand
CG2209-RA 61..522 17..478 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:06:35 Download gff for BS25080.complete
Subject Subject Range Query Range Percent Splice Strand
CG2209-RA 61..522 17..478 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:52:22 Download gff for BS25080.complete
Subject Subject Range Query Range Percent Splice Strand
CG2209-RA 61..522 17..478 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:52:22 Download gff for BS25080.complete
Subject Subject Range Query Range Percent Splice Strand
X 13022258..13022719 17..478 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:06:35 Download gff for BS25080.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 12916291..12916752 17..478 100   Plus

BS25080.pep Sequence

Translation from 16 to 477

> BS25080.pep
MPVLKLNAYFTKFFPSSMVRSKELVRRRYSMKVAQVRRSYNIKFNEDPEF
ECDATVTNMPQSLKTMIKRKLLSKRVIGSFRLRFHSNSFKKRLEITATIT
NPTVPSDTDLAPEDEQLYELYICSSQGQLLGKIPFLESDYRRAAREAIDF
LAF*

BS25080.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:39:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG2209-PA 153 CG2209-PA 1..153 1..153 777 100 Plus