BS25083.complete Sequence
506 bp assembled on 2011-06-27
GenBank Submission: KX806211
> BS25083.complete
GAAGTTATCAGTCGACATGGTGTACCCAGTGCGGAACAAGGACGATCTTG
ACCAGCAGCTAATCCTCGCCGAGGACAAGCTGGTGGTAATTGATTTTTAT
GCAGACTGGTGCGGACCTTGCAAGATAATAGCACCCAAGCTGGACGAACT
GGCGCAGCAGTACTCGGACCGTGTCGTCGTACTCAAGGTGAACGTGGACG
AGAACGAGGACATTACGGTCGAATACAATGTGAATAGCATGCCCACTTTT
GTGTTCATCAAGGGCGGCAATGTGCTGGAGCTCTTCGTTGGCTGCAATTC
CGATAAGCTGGCCAAATTGATGGAGAAGCATGCCGGCGTTTATACCGATG
AAGCGGCCGACGTTAAGGCCGTCCATATCGATGGCGAATGCATTGTCGAT
CTGACCGCCGAGTCCAGTGAAAGCGACAACGACAACAACAACGTTAATGA
GGTGTCCGCCCACGACGAGAATGCCGTTCTGGAGCACTAGAAGCTTTCTA
GACCAT
BS25083.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:55:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TrxT-RB | 474 | CG3315-PB | 1..474 | 17..490 | 2370 | 100 | Plus |
| TrxT-RA | 474 | CG3315-PA | 1..474 | 17..490 | 2370 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:55:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TrxT-RB | 1104 | CG3315-RB | 44..518 | 16..490 | 2375 | 100 | Plus |
| TrxT-RA | 1108 | CG3315-RA | 44..518 | 16..490 | 2375 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:55:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5311238..5311712 | 490..16 | 2375 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:55:45 has no hits.
BS25083.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:24:27 Download gff for
BS25083.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TrxT-RA | 45..518 | 17..490 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:06:18 Download gff for
BS25083.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TrxT-RA | 45..518 | 17..490 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:52:00 Download gff for
BS25083.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TrxT-RA | 45..518 | 17..490 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:52:00 Download gff for
BS25083.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5311238..5311711 | 17..490 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:06:18 Download gff for
BS25083.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5205271..5205744 | 17..490 | 100 | | Minus |
BS25083.pep Sequence
Translation from 16 to 489
> BS25083.pep
MVYPVRNKDDLDQQLILAEDKLVVIDFYADWCGPCKIIAPKLDELAQQYS
DRVVVLKVNVDENEDITVEYNVNSMPTFVFIKGGNVLELFVGCNSDKLAK
LMEKHAGVYTDEAADVKAVHIDGECIVDLTAESSESDNDNNNVNEVSAHD
ENAVLEH*
BS25083.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:39:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TrxT-PB | 157 | CG3315-PB | 1..157 | 1..157 | 817 | 100 | Plus |
| TrxT-PA | 157 | CG3315-PA | 1..157 | 1..157 | 817 | 100 | Plus |
| Trx-2-PA | 106 | CG31884-PA | 1..103 | 1..103 | 324 | 59.2 | Plus |
| Trx-2-PB | 106 | CG31884-PB | 1..103 | 1..103 | 324 | 59.2 | Plus |
| dhd-PB | 107 | CG4193-PB | 4..103 | 5..104 | 251 | 46 | Plus |
