BS25117.complete Sequence
893 bp assembled on 2011-06-27
GenBank Submission: KX805346
> BS25117.complete
GAAGTTATCAGTCGACATGGCACACCTGCGGGAGACCTCGGACAAGGCGC
TGAAGCTGTTGCGTACTTTACCGCGCGTTCAAATCGGCAATCTGCGACCA
AATCCAAACTCAAAACAGAATGACAAGCGCGGCAGGGCACAACACGGAGG
AGATAAGCACGGAGCGGGCAACAAGGGATCCGGTCAGCGGCAGAACTTCA
TGCGATTGGGCTATGAAACGGGCAATCAGCCCTTCTACTTGAGATTTCCC
TACGAGCCCTACTACAAGGGACACCACCTAAAGCGCCAGTATCCGCCCAT
TTCGCTGCTCCAACTGCAAGTGCTCATCGACACGAACCGCATAGACATCA
GCCAGCCCATCGACATCAGCACGCTGTGTAACTCTGGCCTCCTGAAACTG
AAACCCGCTGAAATGGAGTACGGTTTCCAGCTGACGGACGATGGGCTGGA
CAATTTCCAGGCTAAGATCAACATTGAGGTGCAGCACGCCAGCGAGGCGG
TCATAGCGGCCATAGAGAAGAACGGCGGTGTAATCCGTACGGCCTATTAC
GATCCACGCAGCCTTCACATGCTGGCCAATCCGAAGAAGTGGTTCGAAAA
GGGAGTACCTATTCCTAGCCGCATGCTGCCGCCCCAGGATGCAGTGGACT
ACTATACGGATCCCAAGAATCGCGGCTACCTGGCCAATCCCGAGGCGATC
AGCCAGGACCGCCTAGTTCTGGCCCAGAAGTACGGCTATCAGCTGCCCAA
AATTGAGGAAGATTCCGCGTACGAGATGCTCACCACAGCGAAGGATCCAA
GGCAAGTATTCTACGGCCTGGAACCCGGCTGGCTGATCAACATAGTGGAC
AAAACGATCATTAAGCGCAAGCAATAAAAGCTTTCTAGACCAT
BS25117.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:46:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpL15-RA | 861 | CG5219-PA | 1..861 | 17..877 | 4305 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:46:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpL15-RA | 1029 | CG5219-RA | 120..980 | 17..877 | 4305 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:46:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 20435159..20435914 | 877..122 | 3780 | 100 | Minus |
3L | 28110227 | 3L | 20435985..20436090 | 122..17 | 530 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:46:44 has no hits.
BS25117.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:24:47 Download gff for
BS25117.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL15-RA | 82..940 | 17..875 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:44:18 Download gff for
BS25117.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL15-RA | 120..978 | 17..875 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:03:28 Download gff for
BS25117.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL15-RA | 120..978 | 17..875 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:03:28 Download gff for
BS25117.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 20435161..20435914 | 122..875 | 100 | <- | Minus |
3L | 20435986..20436090 | 17..121 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:44:18 Download gff for
BS25117.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 20428261..20429014 | 122..875 | 100 | <- | Minus |
arm_3L | 20429086..20429190 | 17..121 | 100 | | Minus |
BS25117.pep Sequence
Translation from 16 to 876
> BS25117.pep
MAHLRETSDKALKLLRTLPRVQIGNLRPNPNSKQNDKRGRAQHGGDKHGA
GNKGSGQRQNFMRLGYETGNQPFYLRFPYEPYYKGHHLKRQYPPISLLQL
QVLIDTNRIDISQPIDISTLCNSGLLKLKPAEMEYGFQLTDDGLDNFQAK
INIEVQHASEAVIAAIEKNGGVIRTAYYDPRSLHMLANPKKWFEKGVPIP
SRMLPPQDAVDYYTDPKNRGYLANPEAISQDRLVLAQKYGYQLPKIEEDS
AYEMLTTAKDPRQVFYGLEPGWLINIVDKTIIKRKQ*
BS25117.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:44:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpL15-PA | 286 | CG5219-PA | 1..286 | 1..286 | 1514 | 100 | Plus |