BS25121.complete Sequence
3212 bp assembled on 2011-07-19
GenBank Submission: KX804808
> BS25121.complete
GAAGTTATCAGTCGACATGATAAAAATTAGCGATGAAAAGACCTGGCAGA
GCAGCAGAGACTCAGTCTACGAAGTTGGCGACTCGTATAGCGGCCAGAAT
GCCAATCGACCTCTGGTGGCCACGAACTGCTCCGAATATGCGGTGGCCCA
TGCAAACTGCCAGTTGCGTCCGGTTCGTCGATTTGCGGAGGTTTCTCTTC
TGCCGGACATCCTGGAAACCATGAGAAACTTGGGCCTAAACCGGTTGCTC
CGACTGCAAAGCTACACATGGCCACACTTGGCCGGAGGATCTGGGCACGG
GGCGATGATTGTGGGGTCTCCGGCCAGTGGTCGCACTTTTGCTTATATAC
CACCTGTTTGCCATGCTGTTTCCAGAGCTCTAATGGATTTCACAGGTCAG
TGCGAGGATGTGGAGCACGATATCTCTCAACCGGATCGCTATGGCCCCAT
AGCATTGATCCTCGTACCGGATCTGCGACGCGTTCACCAGGTCAGCGCGA
TGTGTCTAGCCCTGCTGCGCAAGGCGCATAAGAATGACTCCGTTACATTG
GCACTCAATGTTTCCTCCACGAAAAGTTCACAGTTCTTCCTCAAGCTTTT
GAACGGAGTTGGTTGCCTGGTGGCCACTCCTGCTCAGCTGGTATGGTTTT
GGCAAGAAGCTCCTGGCCTAATGCGATTTCCGTGCCTGCAGTTCCTAGTG
TACGACGACGTGGACCTGATGTCCAGGGAGCAGCTACAGGACGTTCAGCA
GGTGCTGCAGGAGATCCTCCCCCTGTCACACTCTCCCCAAGTGGTAATGG
TTTCGAAGTCATATTGTCACACGCTGATGTCCAAATTAAGAGCTGTCAAC
GATAAACCGGCTCTTGTATTCGGCGATATACTGGAGGCTGCCCTTTACGG
CGGAACACGTATACGAATCTCCATAATGCGCTCAGAAGCTAAGGCCAACG
CAGTGGTCCAAATGCTGCAGCAGTGTTCCCCCGAGGAGTTCCGAACGGTT
ATTTTCTGCAGCGATGACGGGGACATGCAATGCCTCGTGGCAGCTTTGGA
AGTTCAACACTACAGTTGCCTACCTTACTACCAGACTGCAGACCTGGAGG
TTAGGCAGCAGGTCCATAGCTGGCAGGCAAGAAGCAACGGTGTTATTTTG
CTGTGCACAGACAATTGTCCGGAGCTGGACATTCGAGATGCGCACACCAT
AATTCATCACAGTATGAGTCACTCGTGGAGCAAGTTTAAGTTAAGGCACC
TCAAAATATCCGACAATCTTTGCAATATGGTGAAACCTACAGCGAGCATT
GTGAAGAAGCCACTGTATTCTCTGGTGCTCCTTGACGATAACAATCACCG
TCAATTGCCGCGTCTCGTAGACTTTCTTCAGCTGCACCAAAAAGTGGACC
ACCGCTTAGTTGAGGTGGCCAAACGAATACGGCAGGAGTTGGGAAAAGCC
AGAAACGACCAGCATCAGTTGTGCGATCAAATCCTAGTGCTGGGCAAGTG
CTACGATCCTGTTTGCGAGAGTCGTCATCGCCTGTCCCATATCGACAGGA
GGCCTGATTACTTGCCCGCGTCTGGAGATGTCAAGGTTCAGCTAGTCAAG
GTTTACTCGCCGACACATTTTTGCGTTCGCCTACTTGAACATCTACCGCC
CAAAGGCACGTGGCGGATGATGGAATATTCGGCTGTACAGGAGTTCCGCA
TGCAGTTGACGCAGATCAAGGAGCCCCGACGCTACTGGCCACCTGTTGCC
GGAGCAATTTGTATGTACCACACCACATTTACCAAGGAGCGTGTTCGCGT
CCTGAAGGTGGCGGCTATAAAAAACACGAACATAGTTCAATCCGATTTGA
CAGTGAAACTCCAGGCCCTAGACGTTGACACGCGGATCTTCTCTACGAAC
TGTGGAAAACTGTTTGAGTGTCCGGAGGCGTTGCAGCAGGAGGCTCCGTT
GGCCTGCGATCTGCGCCTTCCAGGCTGGGTGCCTTATTTCGGCGAGCGCA
GCTGGACTGAAGAAAATATTCGCAATGTAAATTTAATTCTGACCCAACTT
CCAAAAGATCACTTCCTGCAGGCCAAAATACTTTTCGTCGCCGCAGGAAC
TTTGTTTGTCCAGGATCTGGTAGCCATAATGTATGCGGACCAATTTAAGG
CGCATGTGCGGCACCTAAGCCTAGCAAGGCGTCTTGTTGAAGCAACCTTA
GTCAAAAGAAGTGAGAATGCTGCCGAAATGATCCGGGAATTTTTTGCGGA
GGTGATAATAGAAGACGATATAGATGAGAACGTTCAGGATTCCAAGGAAA
AAGCAAATAGCAAACCACATGAAAAAATGAAAGGTAAGATGACAGATCAA
CCGGCCAAGCTGCAGAGTCAGCCGCCTTTAAGCGGTAGGTGTCTGCGACT
AGCCAATATGGCTCACGAGTCGGTCAAGGAGAATCAGCTGCATCAGGAAC
TGCAAGAAAGACGATATGAAACCCCGGAAATACCACACCAATCCAACGAA
TCTGACATCCCTCAATCCAATGAAGACAGATTTTCCCAACTGTATGAGTG
TATCATGAATTGCGCCTCTTTACAGCTGGAAGATGAAAGTAAACCGGCAA
AGCATCCTGACCATGTGCTCAGCGAGTCAGTTGAATTCCATAAAATTATG
ACAAACGAGGATGCTACACCTGACCATACTCAGGAGAAGACTGCATTACT
ACTACTTCCTAACAATGTAGCGAGACCGTCCGTGACCTACTATCAGACCA
TGACTACCTTAGAGTTTCAGGTGTTTCTGCCAGAAGATGACCATGACTAC
AAGGCGCTACTGCTCGGAGCACAGTTGTTCTTTAGGGCAATCTCCAAATC
CTCAGATTTAATTCTGCAGTTTATTATGACCCTCAGATTTCCATACAGCT
CAATGAGTCATAACATCCGCGGACGGACTGTGTACATAAGTGTCAAAAAG
CTGCTGGCCCTTATCGATCCATTGGCATTCAGAGAGTATCGATTTCTAAA
GCCCAATCACGATTTGTTCGATAAGGTTGATAAACAACTACAGGAGACAC
AGAATCGATTGGTTCGTTTCCTGGAGGATATGAATTATGTGAAACGAAAT
TTCGAGGGACAGGAAAAGCGCGAGACCAGTGAGGACGAAGAAGTGAATGT
GGAAGGGATTGAGCGTCCAGACTGCCATAAAATATGGGACTTATAAAAGC
TTTCTAGACCAT
BS25121.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:07:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| BoYb-RA | 3180 | CG11133-PA | 1..3180 | 17..3196 | 15900 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:07:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| BoYb-RA | 3559 | CG11133-RA | 93..3272 | 17..3196 | 15900 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:07:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22902004..22905183 | 17..3196 | 15900 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:07:05 has no hits.
BS25121.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-19 14:09:12 Download gff for
BS25121.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11133-RA | 71..3248 | 17..3194 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:47:20 Download gff for
BS25121.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| BoYb-RA | 93..3270 | 17..3194 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:51:45 Download gff for
BS25121.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| BoYb-RA | 93..3270 | 17..3194 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:51:45 Download gff for
BS25121.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22902004..22905181 | 17..3194 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:47:20 Download gff for
BS25121.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22895104..22898281 | 17..3194 | 100 | | Plus |
BS25121.pep Sequence
Translation from 16 to 3195
> BS25121.pep
MIKISDEKTWQSSRDSVYEVGDSYSGQNANRPLVATNCSEYAVAHANCQL
RPVRRFAEVSLLPDILETMRNLGLNRLLRLQSYTWPHLAGGSGHGAMIVG
SPASGRTFAYIPPVCHAVSRALMDFTGQCEDVEHDISQPDRYGPIALILV
PDLRRVHQVSAMCLALLRKAHKNDSVTLALNVSSTKSSQFFLKLLNGVGC
LVATPAQLVWFWQEAPGLMRFPCLQFLVYDDVDLMSREQLQDVQQVLQEI
LPLSHSPQVVMVSKSYCHTLMSKLRAVNDKPALVFGDILEAALYGGTRIR
ISIMRSEAKANAVVQMLQQCSPEEFRTVIFCSDDGDMQCLVAALEVQHYS
CLPYYQTADLEVRQQVHSWQARSNGVILLCTDNCPELDIRDAHTIIHHSM
SHSWSKFKLRHLKISDNLCNMVKPTASIVKKPLYSLVLLDDNNHRQLPRL
VDFLQLHQKVDHRLVEVAKRIRQELGKARNDQHQLCDQILVLGKCYDPVC
ESRHRLSHIDRRPDYLPASGDVKVQLVKVYSPTHFCVRLLEHLPPKGTWR
MMEYSAVQEFRMQLTQIKEPRRYWPPVAGAICMYHTTFTKERVRVLKVAA
IKNTNIVQSDLTVKLQALDVDTRIFSTNCGKLFECPEALQQEAPLACDLR
LPGWVPYFGERSWTEENIRNVNLILTQLPKDHFLQAKILFVAAGTLFVQD
LVAIMYADQFKAHVRHLSLARRLVEATLVKRSENAAEMIREFFAEVIIED
DIDENVQDSKEKANSKPHEKMKGKMTDQPAKLQSQPPLSGRCLRLANMAH
ESVKENQLHQELQERRYETPEIPHQSNESDIPQSNEDRFSQLYECIMNCA
SLQLEDESKPAKHPDHVLSESVEFHKIMTNEDATPDHTQEKTALLLLPNN
VARPSVTYYQTMTTLEFQVFLPEDDHDYKALLLGAQLFFRAISKSSDLIL
QFIMTLRFPYSSMSHNIRGRTVYISVKKLLALIDPLAFREYRFLKPNHDL
FDKVDKQLQETQNRLVRFLEDMNYVKRNFEGQEKRETSEDEEVNVEGIER
PDCHKIWDL*
BS25121.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:04:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| BoYb-PA | 1059 | CG11133-PA | 1..1059 | 1..1059 | 5540 | 100 | Plus |
| SoYb-PC | 1476 | CG31755-PC | 466..1119 | 43..730 | 504 | 23.8 | Plus |
| SoYb-PB | 1476 | CG31755-PB | 466..1119 | 43..730 | 504 | 23.8 | Plus |
| fs(1)Yb-PA | 1042 | CG2706-PA | 381..963 | 65..666 | 330 | 23.3 | Plus |
