BS25124.complete Sequence
797 bp assembled on 2011-06-27
GenBank Submission: KX804900
> BS25124.complete
GAAGTTATCAGTCGACATGCCAGCGGTTGTGCGAATCAAGCGACGCATCG
ACGAGGAGCCTCAGACGGCATTTGTGCTAAACGGCAAGCGGCGGCGCCTC
CACAACGATGAGAACGCCCTGGAGGACGCGGGAGCGGTGGCGGGAGCGGT
GGCGGGAGCGGTGGCATCAGACAAAGACGAACTGACCACCGTGCTCAAGT
TTGCCGGCACGCTGGAAAAGCAGGACGACTGTGCCACTCGTAAATTCGCC
GCTGCCAGGCTCAACAAGGCCGCAGCCCGTGATCTGGTGCAACAGCAGCG
CTCCAATGATGCAGCCATTGCTAGTGCGCTGCGCAGAGATCGCCAGCGGC
AGGAGGCTCAGGAGAACTCAAGGGAGCAGCGTTTCCGGGTCGTAAACTGC
CTGCGCAGCACGCTCGAAAACAGTGCCGCAGAAGCGGAATGCCCGGAGAG
CCAGAGTCATGAGTCCAGCAGCCACATAACCATCGTGGACATTGAATCGC
AACAGCAACAGCACATGGGCACTGCAAGTGCAGCAGCTGAGGAGCAGCAG
CAGCAGGAGATAGCACCCAGCCAGGATCAGCAGCAGCCGGCCGATTCGGA
CGTGGGCTATGTCTACGATCTATATGTTCCCGAGAACGAGATGCAGGCGG
CATATGTGGACATGATGGACGACAACTACTTAAGGTTTGTCATTCAAGTT
GAGCCACAGAAAACGTTGAGCATTACCAATTACTATATGTAAAAGCTTTC
TAGACCTATTCGTGGGGCGCCTCAAAAGGGGGGGGAGGGTTAAAGAG
BS25124.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:45:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
fs(2)ltoPP43-RB | 726 | CG10528-PB | 1..726 | 17..742 | 3630 | 100 | Plus |
fs(2)ltoPP43-RC | 711 | CG10528-PC | 1..671 | 17..687 | 3355 | 100 | Plus |
fs(2)ltoPP43-RA | 1104 | CG10528-PA | 1..668 | 17..684 | 3340 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:45:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
fs(2)ltoPP43-RB | 1870 | CG10528-RB | 106..831 | 17..742 | 3630 | 100 | Plus |
fs(2)ltoPP43-RC | 1471 | CG10528-RC | 106..776 | 17..687 | 3355 | 100 | Plus |
fs(2)ltoPP43-RA | 1338 | CG10528-RA | 106..773 | 17..684 | 3340 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:45:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 19794525..19795047 | 742..220 | 2615 | 100 | Minus |
2L | 23513712 | 2L | 19795539..19795746 | 224..17 | 1040 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:45:49 has no hits.
BS25124.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:24:45 Download gff for
BS25124.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fs(2)ltoPP43-RB | 104..829 | 17..742 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:43:54 Download gff for
BS25124.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fs(2)ltoPP43-RB | 106..831 | 17..742 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:03:09 Download gff for
BS25124.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fs(2)ltoPP43-RB | 106..831 | 17..742 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:03:09 Download gff for
BS25124.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19794525..19795043 | 224..742 | 100 | <- | Minus |
2L | 19795540..19795746 | 17..223 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:43:54 Download gff for
BS25124.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 19794525..19795043 | 224..742 | 100 | <- | Minus |
arm_2L | 19795540..19795746 | 17..223 | 100 | | Minus |
BS25124.pep Sequence
Translation from 16 to 741
> BS25124.pep
MPAVVRIKRRIDEEPQTAFVLNGKRRRLHNDENALEDAGAVAGAVAGAVA
SDKDELTTVLKFAGTLEKQDDCATRKFAAARLNKAAARDLVQQQRSNDAA
IASALRRDRQRQEAQENSREQRFRVVNCLRSTLENSAAEAECPESQSHES
SSHITIVDIESQQQQHMGTASAAAEEQQQQEIAPSQDQQQPADSDVGYVY
DLYVPENEMQAAYVDMMDDNYLRFVIQVEPQKTLSITNYYM*
BS25124.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:44:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
fs(2)ltoPP43-PB | 241 | CG10528-PB | 1..241 | 1..241 | 1208 | 100 | Plus |
fs(2)ltoPP43-PC | 236 | CG10528-PC | 1..223 | 1..223 | 1116 | 100 | Plus |
fs(2)ltoPP43-PA | 367 | CG10528-PA | 1..225 | 1..225 | 1112 | 98.7 | Plus |