BS25135.complete Sequence
948 bp assembled on 2011-06-27
GenBank Submission: KX800589
> BS25135.complete
GAAGTTATCAGTCGACATGCTGCGAAAACAAGCCAGACAGCGAAGGGAAT
ACCTGTACAATAAAGCGCTCACTGAGCGCCTCAAGTCCAAACAAAAAATC
CAGGAGACCGTTGTGAAAAGCATTAATGAAAACAAAGCAATTGGCTCCAA
AAATGTGAAGAAAAGTCTCACCGCCTACAAGTCGCTGAAATACGCGGATG
AGGGTGTCGATGACCGCACTGTCAATGATGAGTATCACTATGCCGGATGC
GAGGATCCGAAAATAATGCTGACCACCTCGCACAACCCTTCGTCGAGATT
GAAAATGTTCATGAAGGAACTGCGGCTGATTATCCCAAATGCGCAGCAGA
TGAACAGAGGAAACTACCAGCTGACTACACTAATGCACGCCTGTCGTGCC
AATAATGTAACCGATTTCCTAATTGTCCATGAGCATCGTGGCATCCCGGA
CAGCCTTGTGGTCTGTCATCTTCCGTACGGGCCAACTGCCTTCTTCAACA
TATCCGATGTGGTTATGCGACATGATATACCCGACATTGGACACATGAGC
GAGCAGAAGCCACACTTAATTTTTAATAACTTTAAAACGCCCATTGGCCT
GAGAACTGTTAAGATACTCAAACACTTGTTCCCAGTGCCCAAGGAGAACT
CCCAAAGAGTTATGTCTTTCCTAAACCACAATGACTCGATTATATTCAGA
CATCATCAGTACAAATATGTGAACAAGGAGTTGGAGCTTACCGAAGTGGG
CCCCAGATTCTCACTGAAGCTGTACCAAATTAAGCTCGGCACTTTGGAGA
ACATCAAGGCAGCTGACACGGAATGGATTAACCGACCTTATATGAATACC
TCGCAGAAGAGGCTCATATTTTCTAACGATCCGGGCATAATAAATAAGGA
CACCGAGGCTTAGAAGCTTTCTAGACCATTCGTTTGGCCCCTAAGAGG
BS25135.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:42:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11920-RA | 897 | CG11920-PA | 1..897 | 17..913 | 4485 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:42:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11920-RA | 1012 | CG11920-RA | 61..958 | 17..914 | 4490 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:42:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25075617..25076328 | 203..914 | 3560 | 100 | Plus |
| 3R | 32079331 | 3R | 25074937..25075125 | 17..205 | 945 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:42:38 has no hits.
BS25135.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:24:38 Download gff for
BS25135.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11920-RA | 56..956 | 17..920 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:42:33 Download gff for
BS25135.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11920-RA | 61..961 | 17..920 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:02:01 Download gff for
BS25135.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11920-RA | 61..961 | 17..920 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:02:01 Download gff for
BS25135.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25074937..25075123 | 17..203 | 100 | -> | Plus |
| 3R | 25075618..25076331 | 204..920 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:42:33 Download gff for
BS25135.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20900659..20900845 | 17..203 | 100 | -> | Plus |
| arm_3R | 20901340..20902053 | 204..920 | 99 | | Plus |
BS25135.pep Sequence
Translation from 16 to 912
> BS25135.pep
MLRKQARQRREYLYNKALTERLKSKQKIQETVVKSINENKAIGSKNVKKS
LTAYKSLKYADEGVDDRTVNDEYHYAGCEDPKIMLTTSHNPSSRLKMFMK
ELRLIIPNAQQMNRGNYQLTTLMHACRANNVTDFLIVHEHRGIPDSLVVC
HLPYGPTAFFNISDVVMRHDIPDIGHMSEQKPHLIFNNFKTPIGLRTVKI
LKHLFPVPKENSQRVMSFLNHNDSIIFRHHQYKYVNKELELTEVGPRFSL
KLYQIKLGTLENIKAADTEWINRPYMNTSQKRLIFSNDPGIINKDTEA*
BS25135.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:40:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11920-PA | 298 | CG11920-PA | 1..298 | 1..298 | 1563 | 100 | Plus |
| CG6712-PA | 394 | CG6712-PA | 106..391 | 7..282 | 335 | 32.3 | Plus |
