BS25136.complete Sequence
371 bp assembled on 2011-06-27
GenBank Submission: KX803440
> BS25136.complete
GAAGTTATCAGTCGACATGCCGGTGGATTGGTTCGGATATGTGTACGCAG
CCACGGTCGCCGCCGGAGGAATCATGGGATACGCCAAGGCGGGTTCCATT
CCCTCGCTGGGTGCTGGTCTGGCCTTCGGAGCCCTGCTCGGTTATGGCGC
CCACCTCAACTCCCAGGACACGCCTCGTCCCCTGCTCCAGCTGGGCACCT
CCCTGTTCCTGGCCGGGCTGATGGGCGCCCGCTGGAACCGATCCGGAAAA
CTGATGCCCGCCGGAATGGTGTGCATGCTATCCGTGGCCGCCTTGGTCAA
GAACCTGGCCACCTATAATCGCTACCTAATGCCTGCCGGCACAAAGGCCC
CTTAGAAGCTTTCTAGACCAT
BS25136.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:42:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5532-RB | 339 | CG5532-PB | 1..339 | 17..355 | 1650 | 99.1 | Plus |
CG5532-RA | 339 | CG5532-PA | 1..339 | 17..355 | 1650 | 99.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:42:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5532-RB | 703 | CG5532-RB | 72..415 | 12..355 | 1660 | 98.8 | Plus |
CG5532-RA | 594 | CG5532-RA | 72..415 | 12..355 | 1660 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:42:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23752964..23753227 | 92..355 | 1275 | 98.9 | Plus |
2R | 25286936 | 2R | 23752825..23752907 | 12..94 | 400 | 98.8 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:42:54 has no hits.
BS25136.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:24:39 Download gff for
BS25136.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5532-RA | 90..428 | 17..355 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:42:40 Download gff for
BS25136.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5532-RA | 77..415 | 17..355 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:02:05 Download gff for
BS25136.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5532-RA | 77..415 | 17..355 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:02:05 Download gff for
BS25136.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23752830..23752905 | 17..92 | 100 | -> | Plus |
2R | 23752965..23753227 | 93..355 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:42:40 Download gff for
BS25136.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19640353..19640428 | 17..92 | 100 | -> | Plus |
arm_2R | 19640488..19640750 | 93..355 | 98 | | Plus |
BS25136.pep Sequence
Translation from 16 to 354
> BS25136.pep
MPVDWFGYVYAATVAAGGIMGYAKAGSIPSLGAGLAFGALLGYGAHLNSQ
DTPRPLLQLGTSLFLAGLMGARWNRSGKLMPAGMVCMLSVAALVKNLATY
NRYLMPAGTKAP*
BS25136.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:40:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5532-PB | 112 | CG5532-PB | 1..112 | 1..112 | 582 | 100 | Plus |
CG5532-PA | 112 | CG5532-PA | 1..112 | 1..112 | 582 | 100 | Plus |