BS25137.complete Sequence
1082 bp assembled on 2011-06-27
GenBank Submission: KX806221
> BS25137.complete
GAAGTTATCAGTCGACATGTCTTCAACCGAAGTGAAGCTATCAAGGCTGC
TGATCTTAGCGCAAAAGTTTAACAACTTTTACCTTTCAGGTATTCATAAG
TGTGACATTCGTCCATTTGTGGTAGAGGGGAAACAAGTTGGTCTTATTAA
GTCAGATGTTTTAAAACATCTCGAAAAGTATCCTGAAGTATTTTGCATTC
GTGCTTGTGAGCAAACTAAACAGGGTTTGGTAGAGCTAAATCCTGCTTTT
CGTGACTATAACGAGCGCACTGAGCAACTGGAAAAGGTTTTGCGTAACTT
GCGCTCCGAGGGACTTTTTCCTGCATTACAGGGATGGAGAGATGAGTATT
TCGAGGTAAAAGCAGACTGCAGAGCTCTACTTAAAATGGAACGAGCTGCT
ACTCCGCTCTTTGGAGTGCGCAAGTACGGCGTCGATATAAACGGTTACGT
AAGACATCCGACGCTTGGACTATGCATTTGGCTGCAGCAGCGGTCAAACA
CAAAAGAGACCTGGCCTGGAAAGTGGGACAATATGGTAGGCGGTGGACTT
TCAGTCGGCTTTGGTATTAAGGAAACAGCCATTAAGGAGGCTGCAGAGGA
GGCATCAATTCCTTCTGACCTAGTCAAGAATTTGGTGTCCGCAGGATGTG
TCTCATTTTACTTTGAAAGCCGACAAGGACTTTTTCCCAATACCGAATAT
GTTTTCGACTTAGAGCTACCACTTGACTTTGTGCCTCAAAACGCTGACGG
GGAGGTCCAGGCCTTTGAGCTGCTAACAGCCAAGGACTGTGTGGAGCGCG
TTTTTACTTCAGATTTCAAGACAACTTCAGCGCCTGTGGTGATTGATTTT
CTTATCCGACACGGTCACATAACAGCAGATGATGTTGTCGACTTCACACA
AATCGTTGAGCTCTTGCACGTGCCCTTACAGTCCATATATACGTACAAGA
CACGCTTTGAGCAATCCATAAAACAACCTCAATTCTTGCCAGGTGATTCC
AAAAACTGTAACTGTGCAATATTTCAGAAAATATCAATGGAGAATGGGCA
CAAGAAGGCGAATTAAAAGCTTTCTAGACCAT
BS25137.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:43:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12567-RG | 1050 | CG12567-PG | 1..1050 | 17..1066 | 5250 | 100 | Plus |
CG12567-RA | 1050 | CG12567-PA | 1..1050 | 17..1066 | 5250 | 100 | Plus |
CG12567-RF | 1026 | CG12567-PF | 50..1026 | 90..1066 | 4885 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:43:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12567-RG | 1907 | CG12567-RG | 22..1071 | 17..1066 | 5250 | 100 | Plus |
CG12567-RA | 2144 | CG12567-RA | 259..1308 | 17..1066 | 5250 | 100 | Plus |
CG12567-RC | 2134 | CG12567-RC | 259..1298 | 17..1066 | 5065 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:43:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 23162212..23162876 | 884..220 | 3325 | 100 | Minus |
2L | 23513712 | 2L | 23323955..23324192 | 884..647 | 1070 | 96.6 | Minus |
2L | 23513712 | 2L | 23415916..23416153 | 647..884 | 1070 | 96.6 | Plus |
2L | 23513712 | 2L | 23161958..23162140 | 1066..884 | 915 | 100 | Minus |
2L | 23513712 | 2L | 23162924..23163060 | 224..88 | 685 | 100 | Minus |
2L | 23513712 | 2L | 23320508..23320637 | 1066..937 | 575 | 96.2 | Minus |
2L | 23513712 | 2L | 23174059..23174134 | 92..17 | 380 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:43:53 has no hits.
BS25137.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:24:41 Download gff for
BS25137.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12567-RA | 283..1330 | 17..1064 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:43:07 Download gff for
BS25137.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12567-RA | 259..1306 | 17..1064 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:02:26 Download gff for
BS25137.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12567-RA | 259..1306 | 17..1064 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:02:26 Download gff for
BS25137.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 23161960..23162139 | 885..1064 | 100 | <- | Minus |
2L | 23162212..23162872 | 224..884 | 100 | <- | Minus |
2L | 23162925..23163058 | 90..223 | 100 | <- | Minus |
2L | 23174062..23174134 | 17..89 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:43:07 Download gff for
BS25137.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2LHet | 20471..20650 | 885..1064 | 100 | <- | Minus |
2LHet | 20723..21383 | 224..884 | 100 | <- | Minus |
2LHet | 21436..21569 | 90..223 | 100 | <- | Minus |
2LHet | 32573..32645 | 17..89 | 100 | | Minus |
BS25137.pep Sequence
Translation from 16 to 1065
> BS25137.pep
MSSTEVKLSRLLILAQKFNNFYLSGIHKCDIRPFVVEGKQVGLIKSDVLK
HLEKYPEVFCIRACEQTKQGLVELNPAFRDYNERTEQLEKVLRNLRSEGL
FPALQGWRDEYFEVKADCRALLKMERAATPLFGVRKYGVDINGYVRHPTL
GLCIWLQQRSNTKETWPGKWDNMVGGGLSVGFGIKETAIKEAAEEASIPS
DLVKNLVSAGCVSFYFESRQGLFPNTEYVFDLELPLDFVPQNADGEVQAF
ELLTAKDCVERVFTSDFKTTSAPVVIDFLIRHGHITADDVVDFTQIVELL
HVPLQSIYTYKTRFEQSIKQPQFLPGDSKNCNCAIFQKISMENGHKKAN*
BS25137.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:40:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12567-PG | 349 | CG12567-PG | 1..349 | 1..349 | 1833 | 100 | Plus |
CG12567-PA | 349 | CG12567-PA | 1..349 | 1..349 | 1833 | 100 | Plus |
CG12567-PF | 341 | CG12567-PF | 12..341 | 20..349 | 1716 | 98.2 | Plus |
CG12567-PD | 335 | CG12567-PD | 12..335 | 26..349 | 1713 | 100 | Plus |
CG12567-PC | 70 | CG12567-PC | 1..69 | 1..69 | 356 | 100 | Plus |