Clone BS25137 Report

Search the DGRC for BS25137

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:251
Well:37
Vector:pDNR-Dual
Associated Gene/TranscriptCG12567-RA
Protein status:BS25137.pep: full length peptide match
Sequenced Size:1082

Clone Sequence Records

BS25137.complete Sequence

1082 bp assembled on 2011-06-27

GenBank Submission: KX806221

> BS25137.complete
GAAGTTATCAGTCGACATGTCTTCAACCGAAGTGAAGCTATCAAGGCTGC
TGATCTTAGCGCAAAAGTTTAACAACTTTTACCTTTCAGGTATTCATAAG
TGTGACATTCGTCCATTTGTGGTAGAGGGGAAACAAGTTGGTCTTATTAA
GTCAGATGTTTTAAAACATCTCGAAAAGTATCCTGAAGTATTTTGCATTC
GTGCTTGTGAGCAAACTAAACAGGGTTTGGTAGAGCTAAATCCTGCTTTT
CGTGACTATAACGAGCGCACTGAGCAACTGGAAAAGGTTTTGCGTAACTT
GCGCTCCGAGGGACTTTTTCCTGCATTACAGGGATGGAGAGATGAGTATT
TCGAGGTAAAAGCAGACTGCAGAGCTCTACTTAAAATGGAACGAGCTGCT
ACTCCGCTCTTTGGAGTGCGCAAGTACGGCGTCGATATAAACGGTTACGT
AAGACATCCGACGCTTGGACTATGCATTTGGCTGCAGCAGCGGTCAAACA
CAAAAGAGACCTGGCCTGGAAAGTGGGACAATATGGTAGGCGGTGGACTT
TCAGTCGGCTTTGGTATTAAGGAAACAGCCATTAAGGAGGCTGCAGAGGA
GGCATCAATTCCTTCTGACCTAGTCAAGAATTTGGTGTCCGCAGGATGTG
TCTCATTTTACTTTGAAAGCCGACAAGGACTTTTTCCCAATACCGAATAT
GTTTTCGACTTAGAGCTACCACTTGACTTTGTGCCTCAAAACGCTGACGG
GGAGGTCCAGGCCTTTGAGCTGCTAACAGCCAAGGACTGTGTGGAGCGCG
TTTTTACTTCAGATTTCAAGACAACTTCAGCGCCTGTGGTGATTGATTTT
CTTATCCGACACGGTCACATAACAGCAGATGATGTTGTCGACTTCACACA
AATCGTTGAGCTCTTGCACGTGCCCTTACAGTCCATATATACGTACAAGA
CACGCTTTGAGCAATCCATAAAACAACCTCAATTCTTGCCAGGTGATTCC
AAAAACTGTAACTGTGCAATATTTCAGAAAATATCAATGGAGAATGGGCA
CAAGAAGGCGAATTAAAAGCTTTCTAGACCAT

BS25137.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:43:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG12567-RG 1050 CG12567-PG 1..1050 17..1066 5250 100 Plus
CG12567-RA 1050 CG12567-PA 1..1050 17..1066 5250 100 Plus
CG12567-RF 1026 CG12567-PF 50..1026 90..1066 4885 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:43:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG12567-RG 1907 CG12567-RG 22..1071 17..1066 5250 100 Plus
CG12567-RA 2144 CG12567-RA 259..1308 17..1066 5250 100 Plus
CG12567-RC 2134 CG12567-RC 259..1298 17..1066 5065 99 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:43:52
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 23162212..23162876 884..220 3325 100 Minus
2L 23513712 2L 23323955..23324192 884..647 1070 96.6 Minus
2L 23513712 2L 23415916..23416153 647..884 1070 96.6 Plus
2L 23513712 2L 23161958..23162140 1066..884 915 100 Minus
2L 23513712 2L 23162924..23163060 224..88 685 100 Minus
2L 23513712 2L 23320508..23320637 1066..937 575 96.2 Minus
2L 23513712 2L 23174059..23174134 92..17 380 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:43:53 has no hits.

BS25137.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:24:41 Download gff for BS25137.complete
Subject Subject Range Query Range Percent Splice Strand
CG12567-RA 283..1330 17..1064 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:43:07 Download gff for BS25137.complete
Subject Subject Range Query Range Percent Splice Strand
CG12567-RA 259..1306 17..1064 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:02:26 Download gff for BS25137.complete
Subject Subject Range Query Range Percent Splice Strand
CG12567-RA 259..1306 17..1064 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:02:26 Download gff for BS25137.complete
Subject Subject Range Query Range Percent Splice Strand
2L 23161960..23162139 885..1064 100 <- Minus
2L 23162212..23162872 224..884 100 <- Minus
2L 23162925..23163058 90..223 100 <- Minus
2L 23174062..23174134 17..89 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:43:07 Download gff for BS25137.complete
Subject Subject Range Query Range Percent Splice Strand
2LHet 20471..20650 885..1064 100 <- Minus
2LHet 20723..21383 224..884 100 <- Minus
2LHet 21436..21569 90..223 100 <- Minus
2LHet 32573..32645 17..89 100   Minus

BS25137.pep Sequence

Translation from 16 to 1065

> BS25137.pep
MSSTEVKLSRLLILAQKFNNFYLSGIHKCDIRPFVVEGKQVGLIKSDVLK
HLEKYPEVFCIRACEQTKQGLVELNPAFRDYNERTEQLEKVLRNLRSEGL
FPALQGWRDEYFEVKADCRALLKMERAATPLFGVRKYGVDINGYVRHPTL
GLCIWLQQRSNTKETWPGKWDNMVGGGLSVGFGIKETAIKEAAEEASIPS
DLVKNLVSAGCVSFYFESRQGLFPNTEYVFDLELPLDFVPQNADGEVQAF
ELLTAKDCVERVFTSDFKTTSAPVVIDFLIRHGHITADDVVDFTQIVELL
HVPLQSIYTYKTRFEQSIKQPQFLPGDSKNCNCAIFQKISMENGHKKAN*

BS25137.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:40:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG12567-PG 349 CG12567-PG 1..349 1..349 1833 100 Plus
CG12567-PA 349 CG12567-PA 1..349 1..349 1833 100 Plus
CG12567-PF 341 CG12567-PF 12..341 20..349 1716 98.2 Plus
CG12567-PD 335 CG12567-PD 12..335 26..349 1713 100 Plus
CG12567-PC 70 CG12567-PC 1..69 1..69 356 100 Plus