BS25141.complete Sequence
839 bp assembled on 2011-06-27
GenBank Submission: KX804838
> BS25141.complete
GAAGTTATCAGTCGACATGGCAGTCGGCAAAAATAAAGGTCTTTCCAAGG
GTGGTAAGAAGGGCGGTAAGAAGAAGGTGGTGGACCCGTTTTCTCGCAAG
GACTGGTACGATGTCAAAGCTCCGAATATGTTTCAAACCCGTCAAATCGG
TAAAACACTTGTAAACCGCACCCAGGGTCAAAGAATAGCATCGGATTATT
TGAAGGGTCGCGTTTTCGAAGTGTCTTTAGCAGACTTGCAAAAGGATATT
GATCCAGAACGTTCTTTTCGCAAGTTCCGTCTTATTGCAGAAGATGTTCA
AGACCGTAATGTGCTCTGTAACTTTCACGGAATGGACTTGACTACGGACA
AGTACAGGTCGATGGTTAAAAAGTGGCAAACACTAATTGAAGCTATTGTC
GAAGCAAAGACTGTAGATGGGTACCTCTTGCGAGTGTTTTGTATCGGATT
TACTGCCAAGGATCAGCAGTCTCAGCGCAAAACATGTTATGCTCAGCAAT
CGCAAGTCCGAAAGATTCGTGCTCGCATGACCGACATTATTACTAATGAA
GTTAGTGGTGCCGATCTAAAGCAGCTTGTTAACAAGCTGGCCTTGGACTC
GATTGCGAAAGATATCGAAAAAAGCTGTCAGCGCATATATCCATTACATG
ATGTTTACATTCGTAAAGTAAAGGTATTGAAGAAACCGCGCTTCGATGTC
TCAAAGCTTCTGGAATTGCATGGCGATGGCGGTGGCAAATCCGTGGAAGC
CGTTGTTTCATCCGAGGGAGCCGTAATCGACCGCCCTGAAGGTTATGAGC
CCCCAGTACAGGAAGCTGTTTAAAAGCTTTCTAGACCAT
BS25141.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:44:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpS3A-RF | 807 | CG2168-PF | 1..807 | 17..823 | 4035 | 100 | Plus |
RpS3A-RA | 807 | CG2168-PA | 1..807 | 17..823 | 4035 | 100 | Plus |
RpS3A-RB | 657 | CG2168-PB | 39..657 | 205..823 | 3095 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:44:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpS3A-RF | 1349 | CG2168-RF | 26..835 | 15..824 | 4050 | 100 | Plus |
RpS3A-RA | 910 | CG2168-RA | 26..835 | 15..824 | 4050 | 100 | Plus |
RpS3A-RB | 854 | CG2168-RB | 160..779 | 205..824 | 3100 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:44:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
4 | 1348131 | 4 | 66272..66740 | 824..356 | 2345 | 100 | Minus |
4 | 1348131 | 4 | 66838..67182 | 359..15 | 1725 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:44:27 has no hits.
BS25141.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:24:43 Download gff for
BS25141.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS3A-RA | 58..862 | 17..821 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:43:20 Download gff for
BS25141.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS3A-RA | 28..832 | 17..821 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:02:38 Download gff for
BS25141.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS3A-RA | 28..832 | 17..821 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:02:38 Download gff for
BS25141.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
4 | 66840..67180 | 17..357 | 100 | | Minus |
4 | 66275..66738 | 358..821 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:43:20 Download gff for
BS25141.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_4 | 86901..87364 | 358..821 | 100 | <- | Minus |
arm_4 | 87466..87806 | 17..357 | 100 | | Minus |
BS25141.pep Sequence
Translation from 16 to 822
> BS25141.pep
MAVGKNKGLSKGGKKGGKKKVVDPFSRKDWYDVKAPNMFQTRQIGKTLVN
RTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVL
CNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQ
QSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDI
EKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSE
GAVIDRPEGYEPPVQEAV*
BS25141.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:44:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpS3A-PF | 268 | CG2168-PF | 1..268 | 1..268 | 1373 | 100 | Plus |
RpS3A-PA | 268 | CG2168-PA | 1..268 | 1..268 | 1373 | 100 | Plus |
RpS3A-PB | 218 | CG2168-PB | 14..218 | 64..268 | 1043 | 100 | Plus |