Clone BS25142 Report

Search the DGRC for BS25142

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:251
Well:42
Vector:pDNR-Dual
Associated Gene/TranscriptCG31381-RA
Protein status:BS25142.pep: full length peptide match
Sequenced Size:1466

Clone Sequence Records

BS25142.complete Sequence

1466 bp assembled on 2011-06-28

GenBank Submission: KX801180

> BS25142.complete
GAAGTTATCAGTCGACATGATTCGAAAGGTGCCGCTAATTGTAGTCCTGG
GCTCCACGGGCACCGGAAAGACGAAACTGTCTTTGCAACTGGCCGAACGC
TTCGGAGGAGAAATAATCAGCGCTGACTCCATGCAGGTTTACACCCACCT
GGACATCGCCACCGCCAAGGCAACCAAGGAGGAGCAGTCCCGGGCACGAC
ATCATCTACTGGACGTGGCCACACCGGCCGAACCCTTCACAGTCACTCAC
TTTCGTAACGCAGCACTGCCCATTGTGGAGCGCCTGCTCGCCAAGGACAC
TTCTCCGATTGTGGTGGGCGGCACGAATTACTACATAGAATCCCTACTTT
GGGATATTCTGGTTGACTCGGATGTCAAGCCGGACGAAGGCAAACATTCG
GGGGAGCATCTTAAGGATGCCGAACTGAATGCTTTGTCCACCCTCGAGCT
GCATCAGCACCTTGCCAAGATCGACGCAGGTAGTGCCAACCGTATTCACC
CCAACAACCGGCGCAAGATCATCCGGGCTATCGAAGTGTATCAGAGCACC
GGGCAGACTTTGAGCCAGATGCTGGCGGAACAGCGGGCACAGCCGGGAGG
AAACCGCCTGGGTGGACCCCTTCGCTATCCACACATCGTTCTCCTTTGGT
TGCGTTGCCAGCAGGATGTTCTAAACGAGCGATTGGATTCCCGCGTAGAT
GGCATGCTGGCCCAAGGGCTGCTCCCTGAACTACGACAGTTTCACAATGC
CCACCATGCTACCACTGTGCAAGCCTATACGTCGGGAGTTCTGCAGACGA
TTGGCTACAAGGAGTTTATTCCCTATCTGATCAAGTACGACCAGCAGCAG
GACGAAAAGATAGAGGAGTACCTCAAAACCCATAGTTACAAGCTGCCAGG
CCCAGAAAAACTGAAAGAAGAAGGTCTTCCAGATGGCTTGGAACTCCTAC
GCAATTGTTGCGAAGAACTAAAGTTAGTCACTCGCCGATACTCAAAGAAG
CAGCTGAAGTGGATCAACAATCGATTCCTGGCCAGCAAAGATCGTCAAGT
GCCGGATCTCTACGAACTGGACACCAGTGATGTGTCAGCTTGGCAGGTGG
CAGTCTACAAGCGGGCAGAGACCATCATAGAAAGCTATCGAAACGAAGAG
GCTTGCGAGATACTACCAATGGCCAAGCGGGAGCATCCTGGAGCGGATTT
GGATGAGGAGACTAGCCATTTTTGTCAAATATGCGAACGGCATTTCGTTG
GGGAGTACCAATGGGGACTGCATATGAAGTCCAACAAACACAAGCGAAGA
AAGGAGGGACAGCGCAAGCGGCAAAGGGATCACGAAACAATGCTCTCAAC
GGATCTAGCGAAGAAGCAAAAGGAGGAGAAAGAGGAGGCAGGAAAGGCGG
AGACTCAGCCACCACCCAGCCGAGTCAATGATACTGATAAGGCAATGTAA
AAGCTTTCTAGACCAT

BS25142.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:25:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG31381-RB 1434 CG31381-PB 1..1434 17..1450 7170 100 Plus
CG31381-RA 1434 CG31381-PA 1..1434 17..1450 7170 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:25:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG31381-RB 1680 CG31381-RB 198..1638 10..1450 7175 99.9 Plus
CG31381-RA 1699 CG31381-RA 217..1657 10..1450 7175 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:25:33
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24877345..24878785 10..1450 7175 99.9 Plus
Blast to na_te.dros performed on 2014-11-26 16:25:34 has no hits.

BS25142.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-28 14:33:54 Download gff for BS25142.complete
Subject Subject Range Query Range Percent Splice Strand
CG31381-RA 201..1632 17..1448 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:00:39 Download gff for BS25142.complete
Subject Subject Range Query Range Percent Splice Strand
CG31381-RB 205..1636 17..1448 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:18:49 Download gff for BS25142.complete
Subject Subject Range Query Range Percent Splice Strand
CG31381-RA 224..1655 17..1448 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:18:49 Download gff for BS25142.complete
Subject Subject Range Query Range Percent Splice Strand
3R 24877352..24878783 17..1448 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:00:39 Download gff for BS25142.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20703074..20704505 17..1448 100   Plus

BS25142.pep Sequence

Translation from 16 to 1449

> BS25142.pep
MIRKVPLIVVLGSTGTGKTKLSLQLAERFGGEIISADSMQVYTHLDIATA
KATKEEQSRARHHLLDVATPAEPFTVTHFRNAALPIVERLLAKDTSPIVV
GGTNYYIESLLWDILVDSDVKPDEGKHSGEHLKDAELNALSTLELHQHLA
KIDAGSANRIHPNNRRKIIRAIEVYQSTGQTLSQMLAEQRAQPGGNRLGG
PLRYPHIVLLWLRCQQDVLNERLDSRVDGMLAQGLLPELRQFHNAHHATT
VQAYTSGVLQTIGYKEFIPYLIKYDQQQDEKIEEYLKTHSYKLPGPEKLK
EEGLPDGLELLRNCCEELKLVTRRYSKKQLKWINNRFLASKDRQVPDLYE
LDTSDVSAWQVAVYKRAETIIESYRNEEACEILPMAKREHPGADLDEETS
HFCQICERHFVGEYQWGLHMKSNKHKRRKEGQRKRQRDHETMLSTDLAKK
QKEEKEEAGKAETQPPPSRVNDTDKAM*

BS25142.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:53:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG31381-PB 477 CG31381-PB 1..477 1..477 2489 100 Plus
CG31381-PA 477 CG31381-PA 1..477 1..477 2489 100 Plus