BS25146.complete Sequence
767 bp assembled on 2011-06-27
GenBank Submission: KX800173
> BS25146.complete
GAAGTTATCAGTCGACATGAGCCGCAACTACAAGGAAGATCAGACCAACG
AGGTCGAGGCGTTGGACTCCATATACTGTGGCGATATGGAGATTCTCGCC
ACGGAGCCGCACCACAAATTCCAGATTCCAATTGCCACGGAGGAGTACAG
TTCGGAGGAGCCCGAGAAAGGTCTTGCCTGCAAACTGGTCTTCACATTCA
CAGCTACCTATCCGGATGGAGCACCCGTGGTGGAAATCGAGGAGCCAGAA
AACTTTGAGGACATGTTTGAAACGCGCCTCCTGGAACACCTGCAAAAGAC
AATTGAGGAGAACCTGGGCATGGAGATGATCTTTTCGCTGGTAAGCAGCG
CCCAGGAGTGGCTGAACGAGCGGTGGGATGAACACAAGTTCCACCAGGAG
GAACTGCGAGAGCAGAAGCTGCGGGAAATCGAAGAGGAGGAACGCAAGAA
GTTTGAGGGCACCCGTGTGACGGTGGAGTCCTTCCTCAAATGGAAGCTCG
AATTCGAGGAGAGCACCGGCATTGCCGCCAAGCGGGAGAAGAACAATGTG
TCCAAGAAGCAGACCGGACGCGAACTCTTTATGTGCGACAACACGCTCAA
CGATTCGGATATCAAGTTCCTCCTGGAGGCGGGTGAAAACATTGAAAATG
TCAAAATCGATGAGACGCTGTTCCAGGATATTGGCGAATTGGATTTGGAT
GACGATGATGATGAGGATTGGGTGCCCGGGGCGGACGACGACGACGATTA
AAAGCTTTCTAGACCAT
BS25146.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:43:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5515-RD | 735 | CG5515-PD | 1..735 | 17..751 | 3675 | 100 | Plus |
| CG5515-RC | 735 | CG5515-PC | 1..735 | 17..751 | 3675 | 100 | Plus |
| CG5515-RB | 735 | CG5515-PB | 1..735 | 17..751 | 3675 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:43:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5515-RD | 922 | CG5515-RD | 109..843 | 17..751 | 3675 | 100 | Plus |
| CG5515-RC | 982 | CG5515-RC | 169..903 | 17..751 | 3675 | 100 | Plus |
| CG5515-RB | 1057 | CG5515-RB | 244..978 | 17..751 | 3675 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:43:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24187803..24188461 | 751..93 | 3295 | 100 | Minus |
| 3R | 32079331 | 3R | 24188516..24188591 | 92..17 | 380 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 15:43:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 367..430 | 381..444 | 122 | 65.6 | Plus |
BS25146.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:24:40 Download gff for
BS25146.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5515-RB | 222..954 | 17..749 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:42:47 Download gff for
BS25146.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5515-RA | 306..1038 | 17..749 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:02:11 Download gff for
BS25146.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5515-RB | 244..976 | 17..749 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:02:11 Download gff for
BS25146.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24187805..24188461 | 93..749 | 100 | <- | Minus |
| 3R | 24188516..24188591 | 17..92 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:42:47 Download gff for
BS25146.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20013527..20014183 | 93..749 | 100 | <- | Minus |
| arm_3R | 20014238..20014313 | 17..92 | 100 | | Minus |
BS25146.pep Sequence
Translation from 16 to 750
> BS25146.pep
MSRNYKEDQTNEVEALDSIYCGDMEILATEPHHKFQIPIATEEYSSEEPE
KGLACKLVFTFTATYPDGAPVVEIEEPENFEDMFETRLLEHLQKTIEENL
GMEMIFSLVSSAQEWLNERWDEHKFHQEELREQKLREIEEEERKKFEGTR
VTVESFLKWKLEFEESTGIAAKREKNNVSKKQTGRELFMCDNTLNDSDIK
FLLEAGENIENVKIDETLFQDIGELDLDDDDDEDWVPGADDDDD*
BS25146.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:40:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5515-PD | 244 | CG5515-PD | 1..244 | 1..244 | 1284 | 100 | Plus |
| CG5515-PC | 244 | CG5515-PC | 1..244 | 1..244 | 1284 | 100 | Plus |
| CG5515-PB | 244 | CG5515-PB | 1..244 | 1..244 | 1284 | 100 | Plus |
| CG5515-PA | 244 | CG5515-PA | 1..244 | 1..244 | 1284 | 100 | Plus |
| CG15605-PA | 152 | CG15605-PA | 25..152 | 2..125 | 159 | 30.2 | Plus |
