Clone BS25148 Report

Search the DGRC for BS25148

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:251
Well:48
Vector:pDNR-Dual
Associated Gene/TranscriptSpase12-RA
Protein status:BS25148.pep: gold
Sequenced Size:329

Clone Sequence Records

BS25148.complete Sequence

329 bp assembled on 2011-08-23

GenBank Submission: KX802334

> BS25148.complete
GAAGTTATCAGTCGACATGTTGGACATCCAGACGCATATGGACTTCGCGG
GTCAGGGAAAGGCGGAGCGCTGGTCGCGCTTCATCATCACGTTCTTCGGA
ATTGTGGGCCTCGTCTACGGAGCCTTCGTGCAGCAGTTCTCACAGACCGT
GTACATCCTGGGCGCCGGATTTGTGCTCTCCTCGCTGATCACCATTCCAC
CTTGGCCGCTGTACCGTCGCAATGCGCTCAAATGGCAGAAACCCATCGAT
ACGGATGCCAAGTCGTCGAGCTCCGAGTCCGGCGACGAGGGCAAGAAGAA
GAAGAAGCAGTAGAAGCTTTCTAGACCAT

BS25148.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:00:13
Subject Length Description Subject Range Query Range Score Percent Strand
Spase12-RA 297 CG11500-PA 1..297 17..313 1455 99.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:00:14
Subject Length Description Subject Range Query Range Score Percent Strand
Spase12-RA 493 CG11500-RA 113..411 17..315 1465 99.3 Plus
CG2006-RA 1916 CG2006-RA 1343..1490 187..40 740 100 Minus
CG2006-RA 1916 CG2006-RA 1159..1287 315..187 615 98.4 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:00:12
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29490810..29490957 187..40 740 100 Minus
3R 32079331 3R 29490626..29490754 315..187 615 98.4 Minus
Blast to na_te.dros performed 2014-11-27 07:00:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 7469..7514 285..327 106 73.9 Plus

BS25148.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-23 17:56:42 Download gff for BS25148.complete
Subject Subject Range Query Range Percent Splice Strand
Spase12-RA 88..379 22..313 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:02:00 Download gff for BS25148.complete
Subject Subject Range Query Range Percent Splice Strand
Spase12-RA 118..409 22..313 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:00:29 Download gff for BS25148.complete
Subject Subject Range Query Range Percent Splice Strand
Spase12-RA 118..409 22..313 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:00:29 Download gff for BS25148.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29490628..29490753 188..313 98 <- Minus
3R 29490810..29490956 41..187 100 <- Minus
3R 29491015..29491033 22..40 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:02:00 Download gff for BS25148.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25316350..25316475 188..313 98 <- Minus
arm_3R 25316532..25316678 41..187 100 <- Minus
arm_3R 25316737..25316755 22..40 100   Minus

BS25148.pep Sequence

Translation from 16 to 312

> BS25148.pep
MLDIQTHMDFAGQGKAERWSRFIITFFGIVGLVYGAFVQQFSQTVYILGA
GFVLSSLITIPPWPLYRRNALKWQKPIDTDAKSSSSESGDEGKKKKKQ*

BS25148.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:20:12
Subject Length Description Subject Range Query Range Score Percent Strand
Spase12-PA 98 CG11500-PA 1..98 1..98 512 100 Plus