BS25149.complete Sequence
476 bp assembled on 2011-06-27
GenBank Submission: KX803310
> BS25149.complete
GAAGTTATCAGTCGACATGGCCAGCACCGAGAGTCTGGATGGCAGTGCCT
TCGAGGGGGACATCTCATCCATTCCGCAAGTGGGCCATCTGACCACAGAG
CCCCAGGAGTTGGAGTGTCCAGCCTGCCAGCAGTTGCAGACTACCCACGT
GAAATCGGAGGCAGTGACCGTTCTGCAGAAGATTGCCTGCTCGCTGAATG
TGCTTCTCTGCTGTAACCCCATTCGCTGGAAGGGCCGTCATGATGTCAAT
CACTACTGCAGCTCCTGTGGCTGTTTCATTGGACGCGACATCACTCTGAG
TTGGTACAAGAGGACCCTCTTTCGGCTGCAACGGGGAGAGGTGGAGGATA
ACGGACGCTGGCAGAGATTCCGCAAGGTGGAGAAGGAGCAGCTGGACGAG
AAAAAACTTGGCAGACAGCGCAAGGCCATCGAATCGAAGCGTTCCAATGA
GAATTATTAAAAGCTTTCTAGACCAT
BS25149.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:45:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30196-RA | 444 | CG30196-PA | 1..444 | 17..460 | 2160 | 99.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:45:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30196-RA | 496 | CG30196-RA | 18..467 | 12..461 | 2175 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:45:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22654834..22655082 | 461..213 | 1200 | 98.8 | Minus |
| 2R | 25286936 | 2R | 22655174..22655375 | 213..12 | 980 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:45:05 has no hits.
BS25149.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:24:44 Download gff for
BS25149.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30196-RA | 22..463 | 17..458 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:43:36 Download gff for
BS25149.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30196-RA | 23..464 | 17..458 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:02:54 Download gff for
BS25149.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30196-RA | 23..464 | 17..458 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:02:54 Download gff for
BS25149.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22654837..22655081 | 214..458 | 98 | <- | Minus |
| 2R | 22655174..22655370 | 17..213 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:43:36 Download gff for
BS25149.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18542342..18542586 | 214..458 | 98 | <- | Minus |
| arm_2R | 18542679..18542875 | 17..213 | 99 | | Minus |
BS25149.pep Sequence
Translation from 16 to 459
> BS25149.pep
MASTESLDGSAFEGDISSIPQVGHLTTEPQELECPACQQLQTTHVKSEAV
TVLQKIACSLNVLLCCNPIRWKGRHDVNHYCSSCGCFIGRDITLSWYKRT
LFRLQRGEVEDNGRWQRFRKVEKEQLDEKKLGRQRKAIESKRSNENY*
BS25149.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:44:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30196-PA | 147 | CG30196-PA | 1..147 | 1..147 | 790 | 100 | Plus |
| CG30195-PA | 153 | CG30195-PA | 13..137 | 16..145 | 203 | 34.6 | Plus |
