BS25150.complete Sequence
392 bp assembled on 2011-06-27
GenBank Submission: KX804476
> BS25150.complete
GAAGTTATCAGTCGACATGCGAGATGTGGACGACAAGATTATATATGCAC
TAAATGCCCTGCCAACGGAGTCGTTTAAGGGTCAAGTGAACAGTGAAAGC
ACCTGTCGCGATCTGTACGCGAAGCTCCAGGAGTCACACTTGGCCAGGCA
AGAAAGCATACGCAGTTGCATAACAATTTCGGCTAGTAATCTGAAGAAGC
TAAGGGAAAAGCGGGAGACCCAGCCGGATGATGTGGATACGGATAACCAG
TTTAGGGCGGAGCAGCGCAAGCTGCGGGTTCTCCAGGCCGAGCTCAATGT
CGAGGACATCATTAAAGATCGTTCCTACAAGACCTTCAATGAACGATGCC
GGTCCTATTTTCATGCTGGCCAATAGAAGCTTTCTAGACCAT
BS25150.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:45:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15881-RC | 360 | CG15881-PC | 1..360 | 17..376 | 1800 | 100 | Plus |
| CG15881-RA | 411 | CG15881-PA | 52..411 | 17..376 | 1800 | 100 | Plus |
| CG15881-RB | 360 | CG15881-PB | 1..360 | 17..376 | 1800 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:45:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15881-RC | 671 | CG15881-RC | 170..529 | 17..376 | 1800 | 100 | Plus |
| CG15881-RA | 660 | CG15881-RA | 159..518 | 17..376 | 1800 | 100 | Plus |
| CG15881-RB | 1642 | CG15881-RB | 1141..1500 | 17..376 | 1800 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:45:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19806321..19806452 | 17..148 | 660 | 100 | Plus |
| 3L | 28110227 | 3L | 19806509..19806632 | 148..271 | 620 | 100 | Plus |
| 3L | 28110227 | 3L | 19806684..19806790 | 270..376 | 535 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:45:29 has no hits.
BS25150.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:24:45 Download gff for
BS25150.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15881-RB | 1141..1500 | 17..376 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:43:46 Download gff for
BS25150.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15881-RB | 1141..1500 | 17..376 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:03:02 Download gff for
BS25150.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15881-RB | 1141..1500 | 17..376 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:03:02 Download gff for
BS25150.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19806510..19806632 | 149..271 | 100 | -> | Plus |
| 3L | 19806686..19806790 | 272..376 | 100 | | Plus |
| 3L | 19806321..19806452 | 17..148 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:43:46 Download gff for
BS25150.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19799421..19799552 | 17..148 | 100 | -> | Plus |
| arm_3L | 19799610..19799732 | 149..271 | 100 | -> | Plus |
| arm_3L | 19799786..19799890 | 272..376 | 100 | | Plus |
BS25150.pep Sequence
Translation from 16 to 375
> BS25150.pep
MRDVDDKIIYALNALPTESFKGQVNSESTCRDLYAKLQESHLARQESIRS
CITISASNLKKLREKRETQPDDVDTDNQFRAEQRKLRVLQAELNVEDIIK
DRSYKTFNERCRSYFHAGQ*
BS25150.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:44:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15881-PC | 119 | CG15881-PC | 1..119 | 1..119 | 607 | 100 | Plus |
| CG15881-PB | 119 | CG15881-PB | 1..119 | 1..119 | 607 | 100 | Plus |
| CG15881-PA | 136 | CG15881-PA | 18..136 | 1..119 | 607 | 100 | Plus |
