BS25155.complete Sequence
3152 bp assembled on 2011-07-19
GenBank Submission: KX801461
> BS25155.complete
GAAGTTATCAGTCGACATGCCTTCGGCACGACCTGGTAGTCTCAAGGATC
CGGAAATAGCCGACCTATTCAACAAGCATGACCCGGAGAAAATCTTCGAG
GACCTGCGCGAAATCGGCCATGGGTCTTTCGGCGCGGTCTATTATGCGCG
ATGCAACCTCACCAGGGAGATCGTGGCCATCAAAAAGATGTCGTACACCG
GCAAGCAGAGCCAGGAGAAGTGGCAGGATATTCTCAAAGAGATACGCTTC
CTTCGCCAATTGAACCACCCGAACACCATAGAATACAAGGGATGCTATTT
GCGCGAATCAACCGCCTGGCTGGTGATGGAGTACTGCGTGGGCTCCGCCT
CGGACATCATCGAGGTGCACAAGAAGCCGCTGCACGAGGACGAGATCGCC
GCCATCTGTCTGGGCGTGCTCAGTGGGTTGAGCTATCTGCACTCGCTGGG
CCGCATCCACCGTGACATCAAGGCGGGCAACATCCTGCTCACGGACAACG
GCGTCGTCAAGCTGGCCGATTTCGGTAGCGCTGCCATCAAGTGTCCGGCC
AACAGTTTTGTCGGCACGCCCTATTGGATGGCGCCCGAGGTGATCCTGGC
CATGGACGAGGGCCAATACGACGGCAAGGTGGACGTGTGGTCGCTGGGCA
TCACCTGCATCGAACTGGCAGAGCGCAAGCCTCCCTACTTTAACATGAAC
GCCATGTCGGCGCTCTACCACATTGCGCAGAATGAGTCGCCGACTCTTCC
GAAGAACGACTGGTCGGATGCGTTTTGCAGCTTTGTTGAACTGTGCCTCA
AGAAGATGCCAGCAGAGCGACCCTCGTCGGCCAAGCTGTTGACCCACGCC
TACGTGACCCGACCGCGTTCCGACACCGTGCTGCTGGAGCTGATCGCGCG
CACCAAGTCAGCGGTGCGCGAGCTGGACAACCTCAATTACCGCAAGATGA
AGAAGATACTCATGGTGGACACCTGCGAGACGGAGAGCGCCGTGGGCGAC
ACCGACGACCAACAGGACGACCATGCCGGCGGCGACAGCAGCAAGAGCAA
TAGTATTACTTCGGAACACTCCATACACTCGGTGGGTGTATCGGCAGCCA
GTAGTCAGAGCTCCTCATCCAATTCCATACCGGCTGCGGCACAGAATCAT
CACCATATCGCTGCGCACCACCACCAGCAGGCGGCTAGCGCCGCTGTGGC
GGCGGCAATGCACCACCATCACCATCCACACCAGCAGCCGCCGCCCAGCT
GGCCAAGCGGCCAGCAAGGACAGCCGGTACCGCCTGGAGCCGTGTCCCGC
AACTCGTCGCGCCATCGAAACCGGCCGCCGCTGCCAAACATAATGCACAG
CATGAACAACAATGTGACGCCAACTAACTCGGCATCGGTGGTGCCGGCAC
CAGCGCCTGCTCCAGTACTCCCACCGCCTATTTCCGTGCTGCCGCATCTG
AGTGCGATGGGCCACGTGGGCGGCGGGGGCACTGGGACCGGTGGCAGCGG
TGGAGGGTCTCCAGCATCCGGTGGACCCCTGGCGGATCGCATCCAGCCCG
TTCAGCCGCGCTATCTGACGACGCCCGCCGCCCAAGCGGCCGTGTATGCG
GCCAGCTCCGCGTCCTCGCAACAGGCCATCTCCAATGCAGTCAACGATCA
CGGGCCCAACAACTTTGCCACCATACGGACCACCAGTATCGTGACCAAGC
AGCAAAAGGAGCACATGCAGGAGGAGATGCACGAACAGATGTCCGGCTAC
AAGCGGATGCGGCGCGAGCACCAGGCGCACCTGGTCAAACTGGAGGAGAA
GTGCAAGGTGGACATGGAGGCGCACAAGACGGCCCTGGACAAGGAGTATG
ACACGCTGCTCCACAACTTTACGAGGGACCTCGATCGGCTTGAGACGAAG
CATCAGCAGGATGTGGAGAGGCGCGCTAAGCAAACGAGCGCCGCCGAGAA
GAAACTACACAAAGAGATTACGCTAAAGCAGGAGAACGATCGCAAGGTGT
ACGACCTGAACCGCAAGAAGGAGTACAAGGCGAACAAGGAGCGCTGGAAG
CGGGAGCTCTCCATGGATGAGTCGACGCCCAAGCGGCAGCGCGATCTTAC
CCTGCAATCGCAGAAGGACAACCTCAAGCAGCACGAGGCGCAGGAGGAGC
AGCGCATGCTCCAGGCCCAGAAGCAGTACATCGAGCTGGAGATGCGCAAG
TTCAAGCGCAAACGGATGATCATGCAGCACGAGCACGAGGATCAGCAGCT
GCGCGACGAGCTCGGAAAGAAGGAGCAGCAACTGCAGCAGGCACACGCCA
TGCTTCTTAAGCACCACGAAAAGACACAGGAGCTGGAGTACCGCCAGCAG
AAGAGCGTGCACCAGTTGCGCGAGGAGCAGATAAACAAGCAACACGATAC
CGAGTTGCATAATCAAAAAGACTACATGGACCGCATCAAGAAGGAGCTGG
TACGCAAGCATGCGGTTGAGCTGAGGCAACAGCCGAAGAGCTTGAAGCAA
AAGGAGCTCCAGATACGCAAGCAGTTCCGGGAAACATGCAAGACGCAGAC
GAAGCAATACAAACGCTACAAGGCCCAAGTACTGCAGACGACACCAAAGG
AGCAACAGAAGGAGGTCATTAAGCAGCTGAAGGAAGAGAAGCATCGCAAG
CTGACGCTGCTCGGTGAACAGTACGAGCAAAGCATTGCGGACATGTTCCA
AAGTCAGAGCTACAAACTAGACGAAAGCCAAGTGATTGAGTGCCAACGTA
CCCACGAGCAGCTGGAGTACGAGCTGGAGATGCTCACTGCCTACCAGAAC
AAGAACAAGAAGCAGGCACAGGAGCAGCGCGATCGCGAGCGTCGTGAGCT
CGAGAATCGCGTCAGCGTGCGGCGTGGCCTGCTCGAGAATAAGATGGACG
CCGAGTTGCAGCAATTCAACCAGGAACGCGCCGAGCGCTTGCGCATGAAA
CACGAGAAGCATACTAAAGAATTGGAAGCATTTGATAACGAATCAATTGC
CCTAGGTTTCAGCACTTTATCTCTGATTGAGGTATCCCGAGAAGCCTATG
CAGATGAGGAGGGAAGTCTGTCTGGTTCAATGATTAGTTTAGCCCATAGC
AATAGTTCAACAAGTTTTCCGGCTGGTTCGCTATAGAAGCTTTCTAGACC
AT
BS25155.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:06:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tao-RF | 3120 | CG14217-PF | 1..3120 | 17..3136 | 15600 | 100 | Plus |
| Tao-RD | 3120 | CG14217-PD | 1..3120 | 17..3136 | 15600 | 100 | Plus |
| Tao-RE | 3120 | CG14217-PE | 1..3120 | 17..3136 | 15600 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:06:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tao-RF | 5483 | CG14217-RF | 503..3623 | 16..3136 | 15605 | 100 | Plus |
| Tao-RD | 3685 | CG14217-RD | 153..3273 | 16..3136 | 15605 | 100 | Plus |
| Tao-RE | 4035 | CG14217-RE | 503..3623 | 16..3136 | 15605 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:06:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19575357..19575973 | 1721..1105 | 3085 | 100 | Minus |
| X | 23542271 | X | 19576695..19577200 | 751..246 | 2530 | 100 | Minus |
| X | 23542271 | X | 19572865..19573230 | 2258..1893 | 1830 | 100 | Minus |
| X | 23542271 | X | 19576039..19576396 | 1108..751 | 1790 | 100 | Minus |
| X | 23542271 | X | 19577265..19577495 | 246..16 | 1155 | 100 | Minus |
| X | 23542271 | X | 19571962..19572190 | 2897..2669 | 1130 | 99.6 | Minus |
| X | 23542271 | X | 19573291..19573468 | 1894..1717 | 890 | 100 | Minus |
| X | 23542271 | X | 19572252..19572427 | 2671..2496 | 880 | 100 | Minus |
| X | 23542271 | X | 19571581..19571707 | 3136..3010 | 635 | 100 | Minus |
| X | 23542271 | X | 19572678..19572800 | 2380..2258 | 615 | 100 | Minus |
| X | 23542271 | X | 19571775..19571895 | 3012..2892 | 605 | 100 | Minus |
| X | 23542271 | X | 19572497..19572617 | 2497..2377 | 605 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:06:55 has no hits.
BS25155.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-19 14:03:26 Download gff for
BS25155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tao-1-RF | 512..3631 | 17..3136 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:47:16 Download gff for
BS25155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tao-RE | 512..3631 | 17..3136 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:51:39 Download gff for
BS25155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tao-RE | 504..3623 | 17..3136 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:51:39 Download gff for
BS25155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19573291..19573464 | 1721..1894 | 100 | <- | Minus |
| X | 19571581..19571704 | 3013..3136 | 100 | <- | Minus |
| X | 19571775..19571893 | 2894..3012 | 100 | <- | Minus |
| X | 19571966..19572187 | 2672..2893 | 100 | <- | Minus |
| X | 19572252..19572425 | 2498..2671 | 100 | <- | Minus |
| X | 19572497..19572613 | 2381..2497 | 100 | <- | Minus |
| X | 19572678..19572800 | 2258..2380 | 100 | <- | Minus |
| X | 19572866..19573228 | 1895..2257 | 100 | <- | Minus |
| X | 19575358..19575969 | 1109..1720 | 100 | <- | Minus |
| X | 19576039..19576395 | 752..1108 | 100 | <- | Minus |
| X | 19576695..19577199 | 247..751 | 100 | <- | Minus |
| X | 19577265..19577494 | 17..246 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:47:16 Download gff for
BS25155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19467324..19467497 | 1721..1894 | 100 | <- | Minus |
| arm_X | 19465614..19465737 | 3013..3136 | 100 | <- | Minus |
| arm_X | 19465808..19465926 | 2894..3012 | 100 | <- | Minus |
| arm_X | 19465999..19466220 | 2672..2893 | 100 | <- | Minus |
| arm_X | 19466285..19466458 | 2498..2671 | 100 | <- | Minus |
| arm_X | 19466530..19466646 | 2381..2497 | 100 | <- | Minus |
| arm_X | 19466711..19466833 | 2258..2380 | 100 | <- | Minus |
| arm_X | 19466899..19467261 | 1895..2257 | 100 | <- | Minus |
| arm_X | 19469391..19470002 | 1109..1720 | 100 | <- | Minus |
| arm_X | 19470072..19470428 | 752..1108 | 100 | <- | Minus |
| arm_X | 19470728..19471232 | 247..751 | 100 | <- | Minus |
| arm_X | 19471298..19471527 | 17..246 | 100 | | Minus |
BS25155.pep Sequence
Translation from 16 to 3135
> BS25155.pep
MPSARPGSLKDPEIADLFNKHDPEKIFEDLREIGHGSFGAVYYARCNLTR
EIVAIKKMSYTGKQSQEKWQDILKEIRFLRQLNHPNTIEYKGCYLRESTA
WLVMEYCVGSASDIIEVHKKPLHEDEIAAICLGVLSGLSYLHSLGRIHRD
IKAGNILLTDNGVVKLADFGSAAIKCPANSFVGTPYWMAPEVILAMDEGQ
YDGKVDVWSLGITCIELAERKPPYFNMNAMSALYHIAQNESPTLPKNDWS
DAFCSFVELCLKKMPAERPSSAKLLTHAYVTRPRSDTVLLELIARTKSAV
RELDNLNYRKMKKILMVDTCETESAVGDTDDQQDDHAGGDSSKSNSITSE
HSIHSVGVSAASSQSSSSNSIPAAAQNHHHIAAHHHQQAASAAVAAAMHH
HHHPHQQPPPSWPSGQQGQPVPPGAVSRNSSRHRNRPPLPNIMHSMNNNV
TPTNSASVVPAPAPAPVLPPPISVLPHLSAMGHVGGGGTGTGGSGGGSPA
SGGPLADRIQPVQPRYLTTPAAQAAVYAASSASSQQAISNAVNDHGPNNF
ATIRTTSIVTKQQKEHMQEEMHEQMSGYKRMRREHQAHLVKLEEKCKVDM
EAHKTALDKEYDTLLHNFTRDLDRLETKHQQDVERRAKQTSAAEKKLHKE
ITLKQENDRKVYDLNRKKEYKANKERWKRELSMDESTPKRQRDLTLQSQK
DNLKQHEAQEEQRMLQAQKQYIELEMRKFKRKRMIMQHEHEDQQLRDELG
KKEQQLQQAHAMLLKHHEKTQELEYRQQKSVHQLREEQINKQHDTELHNQ
KDYMDRIKKELVRKHAVELRQQPKSLKQKELQIRKQFRETCKTQTKQYKR
YKAQVLQTTPKEQQKEVIKQLKEEKHRKLTLLGEQYEQSIADMFQSQSYK
LDESQVIECQRTHEQLEYELEMLTAYQNKNKKQAQEQRDRERRELENRVS
VRRGLLENKMDAELQQFNQERAERLRMKHEKHTKELEAFDNESIALGFST
LSLIEVSREAYADEEGSLSGSMISLAHSNSSTSFPAGSL*
BS25155.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:03:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tao-PF | 1039 | CG14217-PF | 1..1039 | 1..1039 | 5401 | 100 | Plus |
| Tao-PD | 1039 | CG14217-PD | 1..1039 | 1..1039 | 5401 | 100 | Plus |
| Tao-PE | 1039 | CG14217-PE | 1..1039 | 1..1039 | 5401 | 100 | Plus |
| Tao-PI | 1038 | CG14217-PI | 1..1038 | 1..1039 | 5384 | 99.9 | Plus |
| Tao-PJ | 615 | CG14217-PJ | 1..568 | 1..568 | 2997 | 100 | Plus |
