BS25161.complete Sequence
881 bp assembled on 2011-06-27
GenBank Submission: KX801095
> BS25161.complete
GAAGTTATCAGTCGACATGTCGCTAGATTATGAGAAGATGAGCTGGTCGG
ATGTACGGGATCAGTTCAGAACGTGGCGCGAGGAGACGGGTCGCCACAGC
GAGGAGGTGGTCCAGCTGTGGGTTGCTGTGCTAGAGGACAAGGTGCACAA
GACCGGCAACGAGCGGCATCTCATCCTGGAGCAGGTGATCATCGCGGCAT
TGGATACGGCTCGCTTTGACATCGCCACCAAGTGTACCAAGCAGCTGTCC
CTCGAGTTCCCGGGCAGCCTGCGCGTGATGAAGTTCAAAGCGATGCGCTA
CGAGGCCCTGGAGCAGTACGATGAGGCCGACGAGGTCCTGGATGCAATCA
TTGCTAAGGACGAGACAAATGCCGCGCCCAGGAAGCGCAAGATTGCCATC
CTTAAGGCCCGTGGTCGTCGCCTGGAGGCCATCAAGGAGCTCAACGAGTA
TCTGAAGAAGTTTATGTCTGACCAGGAGGCATGGCATGAGCTGTGCAACA
TGTATCTGGCTGAAGGCGAGTTTGGCAAAGCTGCCTTCTGCATGGAGGAG
GTTTTGCTGCACAATCCGCATAGCCATCTAATACACCAGCGTTTGGCAGA
AATACGATACACAATGGGTGGCGTCGAGAATATGGAATCGGCTCGCACTT
ACTATTCGCAGGCCCTGAAGCTTAATCCGCATAACTTGAGGGCCCTTTAT
GGCATTTACTTGTGCTGCAACCATTTGGACAACTCTCGAGCCGTGAGCTC
CAAACGGAAGGAGCTGCAAAAGTTGAGTCAGTGGGCCCTCGAACAACTTT
TGACTAAACAAACGATTGTACCCTTGGAGGCTGCTTTTGGAAACCTGGAA
ATCAAATCGAATTGAAAGCTTTCTAGACCAT
BS25161.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:40:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3678-RB | 849 | CG3678-PB | 1..849 | 17..865 | 4185 | 99.5 | Plus |
CG3678-RA | 849 | CG3678-PA | 1..849 | 17..865 | 4185 | 99.5 | Plus |
CG17556-RB | 849 | CG17556-PB | 1..849 | 17..865 | 4170 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:40:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3678-RB | 1216 | CG3678-RB | 112..960 | 17..865 | 4185 | 99.5 | Plus |
CG3678-RA | 1088 | CG3678-RA | 112..960 | 17..865 | 4185 | 99.5 | Plus |
CG17556-RB | 1089 | CG17556-RB | 113..961 | 17..865 | 4170 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:40:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 16995403..16995814 | 461..50 | 2060 | 100 | Minus |
3R | 32079331 | 3R | 16991182..16991593 | 461..50 | 2000 | 99 | Minus |
3R | 32079331 | 3R | 16990590..16990839 | 865..616 | 1250 | 100 | Minus |
3R | 32079331 | 3R | 16994811..16995060 | 865..616 | 1175 | 98 | Minus |
3R | 32079331 | 3R | 16990900..16991057 | 617..460 | 790 | 100 | Minus |
3R | 32079331 | 3R | 16995121..16995278 | 617..460 | 790 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:40:21 has no hits.
BS25161.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:24:34 Download gff for
BS25161.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3678-RA | 101..948 | 17..864 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:41:32 Download gff for
BS25161.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3678-RA | 112..959 | 17..864 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:10 Download gff for
BS25161.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3678-RA | 112..959 | 17..864 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:10 Download gff for
BS25161.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 16991184..16991592 | 51..459 | 99 | <- | Minus |
3R | 16991734..16991767 | 17..50 | 100 | | Minus |
3R | 16990591..16990838 | 617..864 | 100 | <- | Minus |
3R | 16990901..16991057 | 460..616 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:41:32 Download gff for
BS25161.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 12817456..12817489 | 17..50 | 100 | | Minus |
arm_3R | 12816906..12817314 | 51..459 | 99 | <- | Minus |
arm_3R | 12816313..12816560 | 617..864 | 100 | <- | Minus |
arm_3R | 12816623..12816779 | 460..616 | 100 | <- | Minus |
BS25161.pep Sequence
Translation from 16 to 864
> BS25161.pep
MSLDYEKMSWSDVRDQFRTWREETGRHSEEVVQLWVAVLEDKVHKTGNER
HLILEQVIIAALDTARFDIATKCTKQLSLEFPGSLRVMKFKAMRYEALEQ
YDEADEVLDAIIAKDETNAAPRKRKIAILKARGRRLEAIKELNEYLKKFM
SDQEAWHELCNMYLAEGEFGKAAFCMEEVLLHNPHSHLIHQRLAEIRYTM
GGVENMESARTYYSQALKLNPHNLRALYGIYLCCNHLDNSRAVSSKRKEL
QKLSQWALEQLLTKQTIVPLEAAFGNLEIKSN*
BS25161.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:40:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17556-PB | 282 | CG17556-PB | 1..282 | 1..282 | 1459 | 100 | Plus |
CG17556-PA | 282 | CG17556-PA | 1..282 | 1..282 | 1459 | 100 | Plus |
CG3678-PB | 282 | CG3678-PB | 1..282 | 1..282 | 1456 | 99.6 | Plus |
CG3678-PA | 282 | CG3678-PA | 1..282 | 1..282 | 1456 | 99.6 | Plus |